W6M1 - Error when accessing haplotypes

anopheles-genomic-surveillance / anopheles-genomic-surveillance.github.io

Lecture notes for a course on genomic surveillance of malaria vectors, developed by PAMCA and MalariaGEN

https://anopheles-genomic-surveillance.github.io/

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W6M1 - Error when accessing haplotypes #222

Closed jonbrenas closed 4 months ago

jonbrenas commented 5 months ago

This is caused by the duplicated admin2 assignments for the 21 Gambian samples. The error should be addressed after the patch correcting the cohort assignment is applied or we can specify the cohorts in the code as a stopgap.