antigenomics tcr-cdr-loop-model issues - Githubissues

antigenomics / tcr-cdr-loop-model

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Reinfer models on the fixed data

#19 vadimnazarov opened 7 years ago
0
Fix the data

#18 vadimnazarov closed 7 years ago
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Rewrite EDA after data clearing

#17 vadimnazarov opened 7 years ago
0
Refactor training procedures

#16 vadimnazarov closed 7 years ago
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Predict CDRs from transfered model from putatives to canonicals

#15 vadimnazarov opened 7 years ago
0
Predict canonical / CDR from putative only

#14 vadimnazarov closed 7 years ago
0
Nested cross validation

#13 vadimnazarov opened 7 years ago
1
Merge duplicates

#12 vadimnazarov closed 7 years ago
0
Remove non-canonical from putative

#11 vadimnazarov closed 7 years ago
0
Difference of coordinates / angles as features

#10 vadimnazarov opened 7 years ago
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Simple model with distances between the object and clusters

#9 vadimnazarov opened 7 years ago
1
Fading weights on clusters

#8 vadimnazarov opened 7 years ago
0
Proportions instead of differences for delta models

#7 vadimnazarov opened 7 years ago
0
Leave-K-out cross validation for small number of TCRs

#6 vadimnazarov closed 7 years ago
0
Embeddings

#5 vadimnazarov opened 7 years ago
0
Better folds for cross validations

#4 vadimnazarov closed 7 years ago
1
Visualisation of motifs from Conv nets

#3 vadimnazarov opened 7 years ago
0
Position weight matrix per cluster

#2 vadimnazarov opened 7 years ago
0
Transfer learning

#1 vadimnazarov opened 7 years ago
1