Closed alvesmjoel closed 3 years ago
Can you check if the command conda install -c conda-forge -c bioconda haystac
works? I experienced the same issue and this fix helped.
If that doesn't work, you could also try python -m pip install git+https://github.com/antonisdim/haystac.git
. This was from the file example/tutorial_example.sh
Thanks, I have tried both suggestions, but the first still gets stuck in the same step and the second prompt an installation error.
Can you check if the command
conda install -c conda-forge -c bioconda haystac
works? I experienced the same issue and this fix helped.If that doesn't work, you could also try
python -m pip install git+https://github.com/antonisdim/haystac.git
. This was from the fileexample/tutorial_example.sh
Hello @alvesmjoel,
I hope you are doing great and apologies for the super delayed response !
We have tried to reduce the list of dependencies needed for the installation of haystac
. Could you possibly follow the updated installation instructions provided on readthedocs
, and try to install the latest version of haystac
from github
please ?
Please let us know if you face any other issues !
Best, Antony
Conda installation unsuccessful when using the command provided in the instructions:
conda install -c bioconda haystac.
Returns the following then gets stuck indefinitely on "Collecting package metadata_Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen solve. Retrying with flexible solve. Solving environment: failed with repodata from currentrepodata.json, will retry with next repodata source. Collecting package metadata (repodata.json): |
System: Ubuntu 14.04.5 LTS