kozbo
commented
4 years ago ➤ Beth Sheets commented:
Send Han instructions for uploading private docker to Terra.
autheticate and make a service account with the "Storage -> Storage Admin" role/permission
follw instructions here to get authticated (I used "json key" method)
https://cloud.google.com/container-registry/docs/advanced-authentication#json-key ( https://cloud.google.com/container-registry/docs/advanced-authentication#json-key )
have Google Container Registry API enabled on project
tag image with right name:
https://support.terra.bio/hc/en-us/articles/360035638032-Publish-a-Docker-container-image-to-Google-Container-Registry-GCR- ( https://support.terra.bio/hc/en-us/articles/360035638032-Publish-a-Docker-container-image-to-Google-Container-Registry-GCR- )
docker push
gcr.io/project/image_name:image_tag ( http://gcr.io/project/image_name:image_tag )
Alisa Manning and Han Chen han.chen.2@uth.tmc.edu are creating dockers and WDLs for GxE analyses
The beginning of their work can be found here: https://dockstore.org/organizations/LSGxE
They want to do these analyses on both TOPMed and GSP (CCDG and AC) datasets. They are in the early stages of developing these software tools. Potentially uploading private dockers and WDLs through Terra’s Methods Repository. How can we support them to showcase this as an NIH Interoperability project? Onboard Han to BDCat.
┆Issue is synchronized with this Jira Story ┆Issue Type: Story ┆Sprint: TOPMed Q3 ┆containerName: AnVIL ┆Issue Number: ANVIL-452 ┆Epic: Add NHGRI workflows For Featured Workspaces