anvilproject / anvil-portal

The NHGRI Analysis Visualization and Informatics Lab-space (AnVIL) website
https://anvilproject.org/
MIT License
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CRDC API to get dbGaP studies #756

Closed NoopDog closed 3 years ago

NoopDog commented 3 years ago

https://docs.gdc.cancer.gov/API/Users_Guide/Search_and_Retrieval/

for GDC

https://datacommons.cancer.gov/data - As you can see here in this page, the controlled datasets in the CRDC are from GDC datacommons.cancer.govdatacommons.cancer.gov

Data | CRDC Key Datasets The NCI CRDC provides access to a variety of open and controlled datasets from NCI programs and key external cancer programs. Key datasets include:

So using the GDC APIs is the easiest way to get all the dbGaP Ids for CRDC

NoopDog commented 3 years ago

complete

MillenniumFalconMechanic commented 3 years ago

Dupe of #1096.