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aodn / python-aodntools

Repository for templates and code relating to generating standard NetCDF files for the Australia Ocean Data Network
GNU Lesser General Public License v3.0
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hourly_timeseries FutureWarnings from pandas #136

Closed mhidas closed 1 year ago

mhidas commented 3 years ago

From @mphemming:

I also get warnings for function stringtochar() on lines 298 and 299 of 'aggregated_timeseries.py'. The warning suggests using function tobytes() instead. (fixed)

hourly_timeseries.py:401: FutureWarning: The frame.append method is deprecated and will be removed from pandas in a future version. Use pandas.concat instead.

and

hourly_timeseries.py:311: FutureWarning: 'base' in .resample() and in Grouper() is deprecated. The new arguments that you should use are 'offset' or 'origin'.

mhidas commented 1 year ago

@mphemming Are you still seeing this warning using the latest version of the code (1.6.3)? If so, could you please give me a bit more detail?

mphemming commented 1 year ago

@mhidas I no longer get this warning message with the latest code. However, I get the following for the hourly product:

df.resample(freq="3s", base=2)

becomes:

df.resample(freq="3s", offset="2s")

ds_var_resample = ds_var.resample('1H', base=0.5) # shift by half hour to centre bin on the hour 498 C:\Users\mphem\OneDrive - UNSW\Work\QC_reports\Code\LTSPs\python-aodntools-master\aodntools\timeseries_products\hourly_timeseries.py:401: FutureWarning: The frame.append method is deprecated and will be removed from pandas in a future version. Use pandas.concat instead. df_metadata = df_metadata.append({'source_file': file, C:\Users\mphem\OneDrive - UNSW\Work\QC_reports\Code\LTSPs\python-aodntools-master\aodntools\timeseries_products\hourly_timeseries.py:311: FutureWarning: 'base' in .resample() and in Grouper() is deprecated. The new arguments that you should use are 'offset' or 'origin'.

Might be worth switching these arguments in a future release.

Python 3.9

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mhidas commented 1 year ago

Thanks @mphemming . I had actually switched to those arguments when I worked on the hourly product last year, but had to revert back to the older args as we were still running this code on Python 3.5 at the time. I'll fix it when I take a look at all the warnings (see #112), hopefully in the next couple of months.

mhidas commented 1 year ago

Actually, we don't need to keep track of this issue separately. It'll just be part of #112