Open lukenoaa opened 6 months ago
Change from refseqs.qza/reftax.qza or classifier.qza to a user-provided file path (alt: Opal provides file path on server)
See how Opal handles this here: https://github.com/Geo-omics/GLAMR_omics_pipelines/blob/adc9f8ca09c68e1b7948669a5163fa40fb873551/Snakefile#L319
@ksilnoaa @CarterRoll @baydenwillms
This has been implemented in Tourmaline V2. I'll close this issue once we migrate to that version.
Change from refseqs.qza/reftax.qza or classifier.qza to a user-provided file path (alt: Opal provides file path on server)
See how Opal handles this here: https://github.com/Geo-omics/GLAMR_omics_pipelines/blob/adc9f8ca09c68e1b7948669a5163fa40fb873551/Snakefile#L319
@ksilnoaa @CarterRoll @baydenwillms