[R] Using freshly installed ARROW fails on RHEL 7

[asfimport]

I tried to install Arrow inside R on a RHEL system inside an devtoolset-9 environment in a fresh R-environment (empty R_LIBS). 

Here is what I did:

scl enable devtoolset-9 bash
cd $SASCL/__R_TEST
export CC=/opt/rh/devtoolset-9/root/usr/bin/gcc
export CXX=/opt/rh/devtoolset-9/root/usr/bin/g++
export CMAKE_PATH=/opt/shared/operations/tmp/a_504k5/cmake3/cmake-3.22.0-linux-x86_64/bin
export PATH=$CMAKE_PATH:$PATH
export TMPDIR=$PWD
export ARROW_R_DEV=TRUE
export ARROW_USE_PKG_CONFIG=FALSE
export LIBARROW_BINARY=FALSE
mkdir -p /var/opt/sas/sasconfig/Lev1/__R_TEST/__R3
export R_LIBS=/var/opt/sas/sasconfig/Lev1/__R_TEST/__R3
R
> install.packages('arrow', '/var/opt/sas/sasconfig/Lev1/__R_TEST/__R3')

Here is the prompt output, and the failing writing of a parquet file afterwards: Note that I am using a proxy system to download the R-Packages and connot access the internet directly to download other dependencies.

> install.packages('arrow', '/var/opt/sas/sasconfig/Lev1/__R_TEST/__R3')
also installing the dependencies ‘bit’, ‘magrittr’, ‘ellipsis’, ‘glue’, ‘assertthat’, ‘bit64’, ‘purrr’, ‘R6’, ‘rlang’, ‘tidyselect’, ‘vctrs’

trying URL 'http://m999jdeap001d.in.bundesbank.de:8081/repository/r-public/src/contrib/bit_4.0.4.tar.gz'
Content type 'application/x-gzip' length 279723 bytes (273 KB)
==================================================
downloaded 273 KB

trying URL 'http://m999jdeap001d.in.bundesbank.de:8081/repository/r-public/src/contrib/magrittr_2.0.1.tar.gz'
Content type 'application/x-gzip' length 265580 bytes (259 KB)
==================================================
downloaded 259 KB

trying URL 'http://m999jdeap001d.in.bundesbank.de:8081/repository/r-public/src/contrib/ellipsis_0.3.2.tar.gz'
Content type 'application/x-gzip' length 8066 bytes
==================================================
downloaded 8066 bytes

trying URL 'http://m999jdeap001d.in.bundesbank.de:8081/repository/r-public/src/contrib/glue_1.5.1.tar.gz'
Content type 'application/x-gzip' length 113815 bytes (111 KB)
==================================================
downloaded 111 KB

trying URL 'http://m999jdeap001d.in.bundesbank.de:8081/repository/r-public/src/contrib/assertthat_0.2.1.tar.gz'
Content type 'application/x-gzip' length 12742 bytes (12 KB)
==================================================
downloaded 12 KB

trying URL 'http://m999jdeap001d.in.bundesbank.de:8081/repository/r-public/src/contrib/bit64_4.0.5.tar.gz'
Content type 'application/x-gzip' length 135091 bytes (131 KB)
==================================================
downloaded 131 KB

trying URL 'http://m999jdeap001d.in.bundesbank.de:8081/repository/r-public/src/contrib/purrr_0.3.4.tar.gz'
Content type 'application/x-gzip' length 375062 bytes (366 KB)
==================================================
downloaded 366 KB

trying URL 'http://m999jdeap001d.in.bundesbank.de:8081/repository/r-public/src/contrib/R6_2.5.1.tar.gz'
Content type 'application/x-gzip' length 63422 bytes (61 KB)
==================================================
downloaded 61 KB

trying URL 'http://m999jdeap001d.in.bundesbank.de:8081/repository/r-public/src/contrib/rlang_0.4.12.tar.gz'
Content type 'application/x-gzip' length 861658 bytes (841 KB)
==================================================
downloaded 841 KB

trying URL 'http://m999jdeap001d.in.bundesbank.de:8081/repository/r-public/src/contrib/tidyselect_1.1.1.tar.gz'
Content type 'application/x-gzip' length 92088 bytes (89 KB)
==================================================
downloaded 89 KB

trying URL 'http://m999jdeap001d.in.bundesbank.de:8081/repository/r-public/src/contrib/vctrs_0.3.8.tar.gz'
Content type 'application/x-gzip' length 782608 bytes (764 KB)
==================================================
downloaded 764 KB

trying URL 'http://m999jdeap001d.in.bundesbank.de:8081/repository/r-public/src/contrib/arrow_6.0.1.tar.gz'
Content type 'application/x-gzip' length 4774511 bytes (4.6 MB)
==================================================
downloaded 4.6 MB

* installing *source* package ‘bit’ ...
** package ‘bit’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c attrutil.c -o attrutil.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c bit.c -o bit.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c chunkutil.c -o chunkutil.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c clone.c -o clone.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c init.c -o init.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c integerutil.c -o integerutil.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c merge.c -o merge.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c rle.c -o rle.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c sort.c -o sort.o
gcc -m64 -std=gnu99 -shared -L/usr/lib64/R/lib -Wl,-z,relro -o bit.so attrutil.o bit.o chunkutil.o clone.o init.o integerutil.o merge.o rle.o sort.o -L/usr/lib64/R/lib -lR
installing to /var/opt/sas/sasconfig/Lev1/__R_TEST/__R3/00LOCK-bit/00new/bit/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘bit’
    finding HTML links ... done
    CoercionToStandard                      html
    Extract                                 html
    Metadata                                html
    PhysVirt                                html
    Sorting                                 html
    Summaries                               html
    as.bit                                  html
    as.bitwhich                             html
    as.booltype                             html
    as.character.bit                        html
    as.character.bitwhich                   html
    as.ri                                   html
    as.which                                html
    bbatch                                  html
    bit-package                             html
    bit                                     html
    bit_in                                  html
    bit_init                                html
    bit_rangediff                           html
    bit_setops                              html
    bit_sort                                html
    bit_sort_unique                         html
    bit_unidup                              html
    bitsort                                 html
    bitwhich                                html
    bitwhich_representation                 html
    booltype                                html
    booltypes                               html
    c.booltype                              html
    chunk                                   html
    chunks                                  html
    clone                                   html
    copy_vector                             html
    countsort                               html
    firstNA                                 html
    get_length                              html
    getsetattr                              html
    in.bitwhich                             html
    intrle                                  html
    is.booltype                             html
    is.na.bit                               html
    length.bit                              html
    maxindex                                html
    merge_rev                               html
    print.bit                               html
    print.bitwhich                          html
    quicksort2                              html
    quicksort3                              html
    range_na                                html
    range_nanozero                          html
    range_sortna                            html
    rep.booltype                            html
    repeat.time                             html
    repfromto                               html
    rev.booltype                            html
    reverse_vector                          html
    ri                                      html
    rlepack                                 html
    still.identical                         html
    str.bit                                 html
    str.bitwhich                            html
    symdiff                                 html
    unattr                                  html
    vecseq                                  html
    xor                                     html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (bit)
* installing *source* package ‘magrittr’ ...
** package ‘magrittr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c pipe.c -o pipe.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c utils.c -o utils.o
gcc -m64 -std=gnu99 -shared -L/usr/lib64/R/lib -Wl,-z,relro -o magrittr.so pipe.o utils.o -L/usr/lib64/R/lib -lR
installing to /var/opt/sas/sasconfig/Lev1/__R_TEST/__R3/00LOCK-magrittr/00new/magrittr/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘magrittr’
    finding HTML links ... done
    aliases                                 html
    compound                                html
    debug_fseq                              html
    debug_pipe                              html
    exposition                              html
    faq-pipe-gender                         html
    freduce                                 html
    fseq                                    html
    functions                               html
    magrittr-package                        html
    pipe                                    html
    pipe_eager_lexical                      html
    print.fseq                              html
    tee                                     html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (magrittr)
* installing *source* package ‘glue’ ...
** package ‘glue’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c glue.c -o glue.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c init.c -o init.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c trim.c -o trim.o
gcc -m64 -std=gnu99 -shared -L/usr/lib64/R/lib -Wl,-z,relro -o glue.so glue.o init.o trim.o -L/usr/lib64/R/lib -lR
installing to /var/opt/sas/sasconfig/Lev1/__R_TEST/__R3/00LOCK-glue/00new/glue/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘glue’
    finding HTML links ... done
    as_glue                                 html
    glue-deprecated                         html
    glue                                    html
    glue_col                                html
    glue_collapse                           html
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpoOa3s3/R.INSTALL3d221941d14b/glue/man/glue_collapse.Rd:16: file link ‘NA_character_’ in package ‘base’ does not exist and so has been treated as a topic
    glue_safe                               html
    glue_sql                                html
    identity_transformer                    html
    quoting                                 html
    trim                                    html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (glue)
* installing *source* package ‘assertthat’ ...
** package ‘assertthat’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘assertthat’
    finding HTML links ... done
    are_equal                               html
    assert-is                               html
    assert_that                             html
    assertions-file                         html
    has_args                                html
    has_attr                                html
    noNA                                    html
    not_empty                               html
    on_failure                              html
    scalar                                  html
    validate_that                           html
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (assertthat)
* installing *source* package ‘R6’ ...
** package ‘R6’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘R6’
    finding HTML links ... done
    R6Class                                 html
    as.list.R6                              html
    is.R6                                   html
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (R6)
* installing *source* package ‘rlang’ ...
** package ‘rlang’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG -I./lib/  -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c capture.c -o capture.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG -I./lib/  -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c export.c -o export.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG -I./lib/  -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c internal.c -o internal.o
In file included from ./lib/rlang.h:83,
                 from internal/arg.c:1,
                 from internal.c:1:
internal/eval-tidy.c: In function ‘rlang_tilde_eval’:
./lib/env.h:33:10: warning: ‘top’ may be used uninitialized in this function [-Wmaybe-uninitialized]
   33 |   return ENCLOS(env);
      |          ^~~~~~~~~~~
In file included from internal.c:8:
internal/eval-tidy.c:417:9: note: ‘top’ was declared here
  417 |   sexp* top;
      |         ^~~
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG -I./lib/  -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c lib.c -o lib.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG -I./lib/  -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c version.c -o version.o
gcc -m64 -std=gnu99 -shared -L/usr/lib64/R/lib -Wl,-z,relro -o rlang.so capture.o export.o internal.o lib.o version.o -L/usr/lib64/R/lib -lR
installing to /var/opt/sas/sasconfig/Lev1/__R_TEST/__R3/00LOCK-rlang/00new/rlang/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘rlang’
    finding HTML links ... done
    abort                                   html
    are_na                                  html
    arg_match                               html
    as_box                                  html
    as_bytes                                html
    as_data_mask                            html
    as_env                                  html
    as_environment                          html
    as_function                             html
    as_label                                html
    as_name                                 html
    as_overscope                            html
    as_pairlist                             html
    as_quosure                              html
    as_string                               html
    as_utf8_character                       html
    bare-type-predicates                    html
    box                                     html
    call2                                   html
    call_args                               html
    call_fn                                 html
    call_inspect                            html
    call_modify                             html
    call_name                               html
    call_parse_type                         html
    call_standardise                        html
    caller_env                              html
    caller_fn                               html
    caller_frame                            html
    catch_cnd                               html
    chr_unserialise_unicode                 html
    cnd                                     html
    cnd_message                             html
    cnd_muffle                              html
    cnd_signal                              html
    cnd_type                                html
    done                                    html
    dots_definitions                        html
    dots_n                                  html
    dots_values                             html
    duplicate                               html
    dyn-dots                                html
    empty_env                               html
    enquo0                                  html
    entrace                                 html
    env                                     html
    env_bind                                html
    env_bind_exprs                          html
    env_binding_are_active                  html
    env_binding_lock                        html
    env_browse                              html
    env_bury                                html
    env_clone                               html
    env_depth                               html
    env_get                                 html
    env_has                                 html
    env_inherits                            html
    env_lock                                html
    env_name                                html
    env_names                               html
    env_parent                              html
    env_poke                                html
    env_print                               html
    env_unbind                              html
    env_unlock                              html
    eval_bare                               html
    eval_tidy                               html
    exec                                    html
    exiting                                 html
    expr_interp                             html
    expr_label                              html
    expr_print                              html
    exprs_auto_name                         html
    f_rhs                                   html
    f_text                                  html
    faq-options                             html
    flatten                                 html
    fn_body                                 html
    fn_env                                  html
    fn_fmls                                 html
    format_error_bullets                    html
    frame_position                          html
    friendly_type                           html
    get_env                                 html
    has_length                              html
    has_name                                html
    hash                                    html
    inherits_any                            html
    inject                                  html
    invoke                                  html
    is_call                                 html
    is_callable                             html
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    is_copyable                             html
    is_empty                                html
    is_env                                  html
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    is_expr                                 html
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    is_frame                                html
    is_function                             html
    is_installed                            html
    is_integerish                           html
    is_interactive                          html
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    is_named                                html
    is_namespace                            html
    is_pairlist                             html
    is_reference                            html
    is_stack                                html
    is_symbol                               html
    is_true                                 html
    is_weakref                              html
    lang                                    html
    lang_head                               html
    lang_modify                             html
    last_error                              html
    lifecycle                               html
    list2                                   html
    local_bindings                          html
    local_options                           html
    missing                                 html
    missing_arg                             html
    mut_node_car                            html
    names2                                  html
    new-vector-along-retired                html
    new-vector                              html
    new_call                                html
    new_formula                             html
    new_function                            html
    new_node                                html
    new_quosures                            html
    new_weakref                             html
    ns_env                                  html
    nse-defuse                              html
    nse-force                               html
    op-definition                           html
    op-get-attr                             html
    op-na-default                           html
    op-null-default                         html
    overscope_eval_next                     html
    pairlist2                               html
    parse_expr                              html
    parse_quosure                           html
    prepend                                 html
    prim_name                               html
    quo_expr                                html
    quo_label                               html
    quo_squash                              html
    quosure                                 html
    raw_deparse_str                         html
    rep_along                               html
    restarting                              html
    return_from                             html
    rlang_backtrace_on_error                html
    rst_abort                               html
    rst_list                                html
    scalar-type-predicates                  html
    scoped_env                              html
    scoped_interactive                      html
    search_envs                             html
    seq2                                    html
    set_attrs                               html
    set_expr                                html
    set_names                               html
    splice                                  html
    stack                                   html
    stack_trim                              html
    string                                  html
    switch_type                             html
    sym                                     html
    tidyeval-data                           html
    trace_back                              html
    type-predicates                         html
    type_of                                 html
    vec_poke_n                              html
    vector-coercion                         html
    vector-construction                     html
    vector-old-ctors                        html
    with_abort                              html
    with_env                                html
    with_handlers                           html
    with_restarts                           html
    wref_key                                html
    zap                                     html
    zap_srcref                              html
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rlang)
* installing *source* package ‘ellipsis’ ...
** package ‘ellipsis’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c dots.c -o dots.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c init.c -o init.o
gcc -m64 -std=gnu99 -shared -L/usr/lib64/R/lib -Wl,-z,relro -o ellipsis.so dots.o init.o -L/usr/lib64/R/lib -lR
installing to /var/opt/sas/sasconfig/Lev1/__R_TEST/__R3/00LOCK-ellipsis/00new/ellipsis/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘ellipsis’
    finding HTML links ... done
    check_dots_empty                        html
    check_dots_unnamed                      html
    check_dots_used                         html
    dots_empty                              html
    dots_used                               html
    ellipsis-package                        html
    safe_median                             html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ellipsis)
* installing *source* package ‘bit64’ ...
** package ‘bit64’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c bsearch.c -o bsearch.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c cache.c -o cache.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c hash64.c -o hash64.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c init.c -o init.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c integer64.c -o integer64.o
integer64.c: In function ‘runif_integer64’:
integer64.c:998:15: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
  998 |     while( (*((long long *) &ii)) == NA_INTEGER64){
      |              ~^~~~~~~~~~~~~~~~~~
integer64.c:1006:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing]
 1006 |     ret[i] = min + ( (long long)(*((unsigned long long *)(&ii))) % d);
      |                                   ~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c sort64.c -o sort64.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c sortuse64.c -o sortuse64.o
gcc -m64 -std=gnu99 -shared -L/usr/lib64/R/lib -Wl,-z,relro -o bit64.so bsearch.o cache.o hash64.o init.o integer64.o sort64.o sortuse64.o -lm -L/usr/lib64/R/lib -lR
installing to /var/opt/sas/sasconfig/Lev1/__R_TEST/__R3/00LOCK-bit64/00new/bit64/libs
** R
** data
** exec
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘bit64’
    finding HTML links ... done
    all.equal.integer64                     html
    as.character.integer64                  html
    as.data.frame.integer64                 html
    as.integer64.character                  html
    benchmark64.data                        html
    benchmark64                             html
    bit64-package                           html
    finding level-2 HTML links ... done

    bit64S3                                 html
    c.integer64                             html
    cache                                   html
    cumsum.integer64                        html
    duplicated.integer64                    html
    extract.replace.integer64               html
    format.integer64                        html
    hashcache                               html
    hashmap                                 html
    identical.integer64                     html
    is.sorted.integer64                     html
    keypos                                  html
    match.integer64                         html
    optimizer64.data                        html
    plusclass                               html
    prank                                   html
    qtile                                   html
    ramsort.integer64                       html
    rank.integer64                          html
    rep.integer64                           html
    runif64                                 html
    seq.integer64                           html
    sort.integer64                          html
    sortnut                                 html
    sum.integer64                           html
    table.integer64                         html
    tiepos                                  html
    unipos                                  html
    unique.integer64                        html
    xor.integer64                           html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (bit64)
* installing *source* package ‘purrr’ ...
** package ‘purrr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c backports.c -o backports.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c coerce.c -o coerce.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c conditions.c -o conditions.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c flatten.c -o flatten.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c init.c -o init.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c map.c -o map.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c pluck.c -o pluck.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c transpose.c -o transpose.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c utils.c -o utils.o
gcc -m64 -std=gnu99 -shared -L/usr/lib64/R/lib -Wl,-z,relro -o purrr.so backports.o coerce.o conditions.o flatten.o init.o map.o pluck.o transpose.o utils.o -L/usr/lib64/R/lib -lR
installing to /var/opt/sas/sasconfig/Lev1/__R_TEST/__R3/00LOCK-purrr/00new/purrr/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘purrr’
    finding HTML links ... done
    accumulate                              html
    along                                   html
    array-coercion                          html
    as_mapper                               html
    as_vector                               html
    at_depth                                html
    attr_getter                             html
    compose                                 html
    cross                                   html
    detect                                  html
    done                                    html
    every                                   html
    exec                                    html
    faq-adverbs-export                      html
    flatten                                 html
    get-attr                                html
    has_element                             html
    head_while                              html
    imap                                    html
    insistently                             html
    invoke                                  html
    is_numeric                              html
    keep                                    html
    lift                                    html
    list_modify                             html
    lmap                                    html
    map                                     html
    map2                                    html
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/map2.Rd:111: file link ‘pmax’ in package ‘base’ does not exist and so has been treated as a topic
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/map2.Rd:111: file link ‘pmin’ in package ‘base’ does not exist and so has been treated as a topic
    map_if                                  html
    modify                                  html
    modify_in                               html
    negate                                  html
    null-default                            html
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/null-default.Rd:13: file link ‘%||%’ in package ‘rlang’ does not exist and so has been treated as a topic
    partial                                 html
    pipe                                    html
    pluck                                   html
    prepend                                 html
    purrr-package                           html
    rate-helpers                            html
    rate_sleep                              html
    rbernoulli                              html
    rdunif                                  html
    reduce                                  html
    reduce_right                            html
    reexports                               html
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/reexports.Rd:39: file link ‘is_atomic’ in package ‘rlang’ does not exist and so has been treated as a topic
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/reexports.Rd:39: file link ‘is_bare_atomic’ in package ‘rlang’ does not exist and so has been treated as a topic
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/reexports.Rd:39: file link ‘is_bare_character’ in package ‘rlang’ does not exist and so has been treated as a topic
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/reexports.Rd:39: file link ‘is_bare_double’ in package ‘rlang’ does not exist and so has been treated as a topic
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/reexports.Rd:39: file link ‘is_bare_integer’ in package ‘rlang’ does not exist and so has been treated as a topic
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/reexports.Rd:39: file link ‘is_bare_list’ in package ‘rlang’ does not exist and so has been treated as a topic
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/reexports.Rd:39: file link ‘is_bare_logical’ in package ‘rlang’ does not exist and so has been treated as a topic
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/reexports.Rd:39: file link ‘is_bare_numeric’ in package ‘rlang’ does not exist and so has been treated as a topic
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/reexports.Rd:39: file link ‘is_bare_vector’ in package ‘rlang’ does not exist and so has been treated as a topic
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/reexports.Rd:39: file link ‘is_character’ in package ‘rlang’ does not exist and so has been treated as a topic
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/reexports.Rd:39: file link ‘is_double’ in package ‘rlang’ does not exist and so has been treated as a topic
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/reexports.Rd:39: file link ‘is_integer’ in package ‘rlang’ does not exist and so has been treated as a topic
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/reexports.Rd:39: file link ‘is_list’ in package ‘rlang’ does not exist and so has been treated as a topic
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/reexports.Rd:39: file link ‘is_logical’ in package ‘rlang’ does not exist and so has been treated as a topic
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/reexports.Rd:39: file link ‘is_null’ in package ‘rlang’ does not exist and so has been treated as a topic
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/reexports.Rd:39: file link ‘is_scalar_atomic’ in package ‘rlang’ does not exist and so has been treated as a topic
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/reexports.Rd:39: file link ‘is_scalar_character’ in package ‘rlang’ does not exist and so has been treated as a topic
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/reexports.Rd:39: file link ‘is_scalar_double’ in package ‘rlang’ does not exist and so has been treated as a topic
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/reexports.Rd:39: file link ‘is_scalar_integer’ in package ‘rlang’ does not exist and so has been treated as a topic
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/reexports.Rd:39: file link ‘is_scalar_list’ in package ‘rlang’ does not exist and so has been treated as a topic
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/reexports.Rd:39: file link ‘is_scalar_logical’ in package ‘rlang’ does not exist and so has been treated as a topic
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/reexports.Rd:39: file link ‘is_scalar_vector’ in package ‘rlang’ does not exist and so has been treated as a topic
Rd warning: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp9JBt44/R.INSTALL3d7793b5a1919/purrr/man/reexports.Rd:39: file link ‘is_vector’ in package ‘rlang’ does not exist and so has been treated as a topic
    rep_along                               html
    rerun                                   html
    safely                                  html
    set_names                               html
    splice                                  html
    transpose                               html
    vec_depth                               html
    when                                    html
    zap                                     html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (purrr)
* installing *source* package ‘vctrs’ ...
** package ‘vctrs’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c altrep-rle.c -o altrep-rle.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c arg-counter.c -o arg-counter.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c arg.c -o arg.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c bind.c -o bind.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c c-unchop.c -o c-unchop.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c c.c -o c.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c callables.c -o callables.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c cast-bare.c -o cast-bare.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c cast-dispatch.c -o cast-dispatch.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c cast.c -o cast.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c compare.c -o compare.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c complete.c -o complete.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c conditions.c -o conditions.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c dictionary.c -o dictionary.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c dim.c -o dim.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c equal.c -o equal.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c fields.c -o fields.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c fill.c -o fill.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c group.c -o group.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c growable.c -o growable.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c hash.c -o hash.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c init.c -o init.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c names.c -o names.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c order-groups.c -o order-groups.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c order-radix.c -o order-radix.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c order-sortedness.c -o order-sortedness.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c order-transform.c -o order-transform.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c order-truelength.c -o order-truelength.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c poly-op.c -o poly-op.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c proxy-restore.c -o proxy-restore.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c proxy.c -o proxy.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c ptype2-dispatch.c -o ptype2-dispatch.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c rep.c -o rep.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c runs.c -o runs.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c shape.c -o shape.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c size-common.c -o size-common.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c size.c -o size.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c slice-array.c -o slice-array.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c slice-assign-array.c -o slice-assign-array.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c slice-assign.c -o slice-assign.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c slice-chop.c -o slice-chop.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c slice.c -o slice.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c split.c -o split.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c subscript-loc.c -o subscript-loc.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c subscript.c -o subscript.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c translate.c -o translate.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c type-data-frame.c -o type-data-frame.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c type-date-time.c -o type-date-time.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c type-factor.c -o type-factor.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c type-info.c -o type-info.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c type-tibble.c -o type-tibble.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c type.c -o type.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c type2.c -o type2.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c typeof2-s3.c -o typeof2-s3.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c typeof2.c -o typeof2.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c unspecified.c -o unspecified.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c utils-dispatch.c -o utils-dispatch.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c utils-rlang.c -o utils-rlang.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c utils.c -o utils.o
gcc -m64 -std=gnu99 -I"/usr/include/R" -DNDEBUG   -I/usr/local/include -fvisibility=hidden -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c version.c -o version.o
gcc -m64 -std=gnu99 -shared -L/usr/lib64/R/lib -Wl,-z,relro -o vctrs.so altrep-rle.o arg-counter.o arg.o bind.o c-unchop.o c.o callables.o cast-bare.o cast-dispatch.o cast.o compare.o complete.o conditions.o dictionary.o dim.o equal.o fields.o fill.o group.o growable.o hash.o init.o names.o order-groups.o order-radix.o order-sortedness.o order-transform.o order-truelength.o poly-op.o proxy-restore.o proxy.o ptype2-dispatch.o rep.o runs.o shape.o size-common.o size.o slice-array.o slice-assign-array.o slice-assign.o slice-chop.o slice.o split.o subscript-loc.o subscript.o translate.o type-data-frame.o type-date-time.o type-factor.o type-info.o type-tibble.o type.o type2.o typeof2-s3.o typeof2.o unspecified.o utils-dispatch.o utils-rlang.o utils.o version.o -L/usr/lib64/R/lib -lR
installing to /var/opt/sas/sasconfig/Lev1/__R_TEST/__R3/00LOCK-vctrs/00new/vctrs/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘vctrs’
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    as-is                                   html
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*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (vctrs)
* installing *source* package ‘tidyselect’ ...
** package ‘tidyselect’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
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    all_of                                  html
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    vars_select                             html
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    where                                   html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (tidyselect)
* installing *source* package ‘arrow’ ...
** package ‘arrow’ successfully unpacked and MD5 sums checked
** using staged installation
trying URL 'https://github.com'
Error in download.file(from_url, to_file, quiet = quietly) :
  cannot open URL 'https://github.com'
*** Found local C++ source: 'tools/cpp'
*** Building C++ libraries
*** Building with MAKEFLAGS= -j2
*** Building C++ library from source, but downloading thirdparty dependencies
    is not possible, so this build will turn off all thirdparty features.
    See install vignette for details:
    https://cran.r-project.org/web/packages/arrow/vignettes/install.html
**** arrow with SOURCE_DIR='tools/cpp' BUILD_DIR='/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpMj8ijC/file3ea2a7cc49d60' DEST_DIR='libarrow/arrow-6.0.1' CMAKE='/opt/shared/operations/tmp/a_504k5/cmake3/cmake-3.22.0-linux-x86_64/bin/cmake' EXTRA_CMAKE_FLAGS=' -DARROW_SIMD_LEVEL=NONE -DARROW_RUNTIME_SIMD_LEVEL=NONE' CC='gcc -m64 -std=gnu99' CXX='g++ -m64 -std=gnu++11' LDFLAGS='-Wl,-z,relro' ARROW_S3='OFF' ARROW_MIMALLOC='OFF' ARROW_JEMALLOC='OFF' ARROW_JSON='OFF' ARROW_PARQUET='OFF' ARROW_DATASET='OFF' ARROW_WITH_BROTLI='OFF' ARROW_WITH_BZ2='OFF' ARROW_WITH_LZ4='OFF' ARROW_WITH_SNAPPY='OFF' ARROW_WITH_ZLIB='OFF' ARROW_WITH_ZSTD='OFF' ARROW_WITH_RE2='OFF' ARROW_WITH_UTF8PROC='OFF'
++ pwd
+ : /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow
+ : tools/cpp
+ : /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpMj8ijC/file3ea2a7cc49d60
+ : libarrow/arrow-6.0.1
+ : /opt/shared/operations/tmp/a_504k5/cmake3/cmake-3.22.0-linux-x86_64/bin/cmake
++ cd tools/cpp
++ pwd
+ SOURCE_DIR=/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/tools/cpp
++ mkdir -p libarrow/arrow-6.0.1
++ cd libarrow/arrow-6.0.1
++ pwd
+ DEST_DIR=/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1
+ '[' '' '!=' '' ']'
+ '[' '' = false ']'
+ ARROW_DEFAULT_PARAM=OFF
+ mkdir -p /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpMj8ijC/file3ea2a7cc49d60
+ pushd /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpMj8ijC/file3ea2a7cc49d60
/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpMj8ijC/file3ea2a7cc49d60 /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow
+ /opt/shared/operations/tmp/a_504k5/cmake3/cmake-3.22.0-linux-x86_64/bin/cmake -DARROW_BOOST_USE_SHARED=OFF -DARROW_BUILD_TESTS=OFF -DARROW_BUILD_SHARED=OFF -DARROW_BUILD_STATIC=ON -DARROW_COMPUTE=ON -DARROW_CSV=ON -DARROW_DATASET=OFF -DARROW_DEPENDENCY_SOURCE=BUNDLED -DAWSSDK_SOURCE= -DARROW_FILESYSTEM=ON -DARROW_JEMALLOC=OFF -DARROW_MIMALLOC=OFF -DARROW_JSON=OFF -DARROW_PARQUET=OFF -DARROW_S3=OFF -DARROW_WITH_BROTLI=OFF -DARROW_WITH_BZ2=OFF -DARROW_WITH_LZ4=OFF -DARROW_WITH_RE2=OFF -DARROW_WITH_SNAPPY=OFF -DARROW_WITH_UTF8PROC=OFF -DARROW_WITH_ZLIB=OFF -DARROW_WITH_ZSTD=OFF -DARROW_VERBOSE_THIRDPARTY_BUILD=OFF -DCMAKE_BUILD_TYPE=Release -DCMAKE_INSTALL_LIBDIR=lib -DCMAKE_INSTALL_PREFIX=/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1 -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_UNITY_BUILD=ON -DARROW_SIMD_LEVEL=NONE -DARROW_RUNTIME_SIMD_LEVEL=NONE -G 'Unix Makefiles' /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/tools/cpp
-- Building using CMake version: 3.22.0
-- The C compiler identification is GNU 9.3.1
-- The CXX compiler identification is GNU 9.3.1
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /opt/rh/devtoolset-9/root/usr/bin/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /opt/rh/devtoolset-9/root/usr/bin/g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Arrow version: 6.0.1 (full: '6.0.1')
-- Arrow SO version: 600 (full: 600.1.0)
-- clang-tidy not found
-- clang-format not found
-- Could NOT find ClangTools (missing: CLANG_FORMAT_BIN CLANG_TIDY_BIN)
-- infer not found
fatal: not a git repository (or any parent up to mount point /var/opt/sas)
Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set).
-- Found Python3: /usr/bin/python3.6 (found version "3.6.8") found components: Interpreter
-- Found cpplint executable at /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/tools/cpp/build-support/cpplint.py
-- System processor: x86_64
-- Performing Test CXX_SUPPORTS_SSE4_2
-- Performing Test CXX_SUPPORTS_SSE4_2 - Success
-- Performing Test CXX_SUPPORTS_AVX2
-- Performing Test CXX_SUPPORTS_AVX2 - Success
-- Performing Test CXX_SUPPORTS_AVX512
-- Performing Test CXX_SUPPORTS_AVX512 - Success
-- Arrow build warning level: PRODUCTION
Using ld linker
Configured for RELEASE build (set with cmake -DCMAKE_BUILD_TYPE={release,debug,...})
-- Build Type: RELEASE
-- Performing Test CXX_LINKER_SUPPORTS_VERSION_SCRIPT
-- Performing Test CXX_LINKER_SUPPORTS_VERSION_SCRIPT - Success
-- Using BUNDLED approach to find dependencies
-- ARROW_ABSL_BUILD_VERSION: 20210324.2
-- ARROW_ABSL_BUILD_SHA256_CHECKSUM: 59b862f50e710277f8ede96f083a5bb8d7c9595376146838b9580be90374ee1f
-- ARROW_AWSSDK_BUILD_VERSION: 1.8.133
-- ARROW_AWSSDK_BUILD_SHA256_CHECKSUM: d6c495bc06be5e21dac716571305d77437e7cfd62a2226b8fe48d9ab5785a8d6
-- ARROW_AWS_CHECKSUMS_BUILD_VERSION: v0.1.10
-- ARROW_AWS_CHECKSUMS_BUILD_SHA256_CHECKSUM: c9d0100a5743765fc8034e34e2310f77f59b1adab6f2e2f2d4d2a3bd81b2a36d
-- ARROW_AWS_C_COMMON_BUILD_VERSION: v0.6.9
-- ARROW_AWS_C_COMMON_BUILD_SHA256_CHECKSUM: 928a3e36f24d1ee46f9eec360ec5cebfe8b9b8994fe39d4fa74ff51aebb12717
-- ARROW_AWS_C_EVENT_STREAM_BUILD_VERSION: v0.1.5
-- ARROW_AWS_C_EVENT_STREAM_BUILD_SHA256_CHECKSUM: f1b423a487b5d6dca118bfc0d0c6cc596dc476b282258a3228e73a8f730422d4
-- ARROW_BOOST_BUILD_VERSION: 1.75.0
-- ARROW_BOOST_BUILD_SHA256_CHECKSUM: cb97b36e2295a321c34851e0455bc2630ad6c691d4f9f589170066cd11c835b4
-- ARROW_BROTLI_BUILD_VERSION: v1.0.9
-- ARROW_BROTLI_BUILD_SHA256_CHECKSUM: f9e8d81d0405ba66d181529af42a3354f838c939095ff99930da6aa9cdf6fe46
-- ARROW_BZIP2_BUILD_VERSION: 1.0.8
-- ARROW_BZIP2_BUILD_SHA256_CHECKSUM: ab5a03176ee106d3f0fa90e381da478ddae405918153cca248e682cd0c4a2269
-- ARROW_CARES_BUILD_VERSION: 1.17.1
-- ARROW_CARES_BUILD_SHA256_CHECKSUM: d73dd0f6de824afd407ce10750ea081af47eba52b8a6cb307d220131ad93fc40
-- ARROW_CRC32C_BUILD_VERSION: 1.1.2
-- ARROW_CRC32C_BUILD_SHA256_CHECKSUM: ac07840513072b7fcebda6e821068aa04889018f24e10e46181068fb214d7e56
-- ARROW_GBENCHMARK_BUILD_VERSION: v1.5.2
-- ARROW_GBENCHMARK_BUILD_SHA256_CHECKSUM: dccbdab796baa1043f04982147e67bb6e118fe610da2c65f88912d73987e700c
-- ARROW_GFLAGS_BUILD_VERSION: v2.2.2
-- ARROW_GFLAGS_BUILD_SHA256_CHECKSUM: 34af2f15cf7367513b352bdcd2493ab14ce43692d2dcd9dfc499492966c64dcf
-- ARROW_GLOG_BUILD_VERSION: v0.4.0
-- ARROW_GLOG_BUILD_SHA256_CHECKSUM: f28359aeba12f30d73d9e4711ef356dc842886968112162bc73002645139c39c
-- ARROW_GOOGLE_CLOUD_CPP_BUILD_VERSION: v1.31.1
-- ARROW_GOOGLE_CLOUD_CPP_BUILD_SHA256_CHECKSUM: dc7cbf95b506a84b48cf71e0462985d262183edeaabdacaaee2109852394a609
-- ARROW_GRPC_BUILD_VERSION: v1.35.0
-- ARROW_GRPC_BUILD_SHA256_CHECKSUM: 27dd2fc5c9809ddcde8eb6fa1fa278a3486566dfc28335fca13eb8df8bd3b958
-- ARROW_GTEST_BUILD_VERSION: 1.10.0
-- ARROW_GTEST_BUILD_SHA256_CHECKSUM: 9dc9157a9a1551ec7a7e43daea9a694a0bb5fb8bec81235d8a1e6ef64c716dcb
-- ARROW_JEMALLOC_BUILD_VERSION: 5.2.1
-- ARROW_JEMALLOC_BUILD_SHA256_CHECKSUM: 34330e5ce276099e2e8950d9335db5a875689a4c6a56751ef3b1d8c537f887f6
-- ARROW_LZ4_BUILD_VERSION: v1.9.3
-- ARROW_LZ4_BUILD_SHA256_CHECKSUM: 030644df4611007ff7dc962d981f390361e6c97a34e5cbc393ddfbe019ffe2c1
-- ARROW_MIMALLOC_BUILD_VERSION: v1.7.2
-- ARROW_MIMALLOC_BUILD_SHA256_CHECKSUM: b1912e354565a4b698410f7583c0f83934a6dbb3ade54ab7ddcb1569320936bd
-- ARROW_NLOHMANN_JSON_BUILD_VERSION: v3.10.2
-- ARROW_NLOHMANN_JSON_BUILD_SHA256_CHECKSUM: 081ed0f9f89805c2d96335c3acfa993b39a0a5b4b4cef7edb68dd2210a13458c
-- ARROW_ORC_BUILD_VERSION: 1.7.0
-- ARROW_ORC_BUILD_SHA256_CHECKSUM: 45d6ba9149ffa2aaa168d61ab326f61181861c94529f26da3918a9aa2f801e39
-- ARROW_PROTOBUF_BUILD_VERSION: v3.17.3
-- ARROW_PROTOBUF_BUILD_SHA256_CHECKSUM: 77ad26d3f65222fd96ccc18b055632b0bfedf295cb748b712a98ba1ac0b704b2
-- ARROW_RAPIDJSON_BUILD_VERSION: 1a803826f1197b5e30703afe4b9c0e7dd48074f5
-- ARROW_RAPIDJSON_BUILD_SHA256_CHECKSUM: 0b6b780b6c534bfb0b23d29910bfe361e486bcfeaf106db8bc8995792072905a
-- ARROW_RE2_BUILD_VERSION: 2021-02-02
-- ARROW_RE2_BUILD_SHA256_CHECKSUM: 1396ab50c06c1a8885fb68bf49a5ecfd989163015fd96699a180d6414937f33f
-- ARROW_SNAPPY_BUILD_VERSION: 1.1.8
-- ARROW_SNAPPY_BUILD_SHA256_CHECKSUM: 16b677f07832a612b0836178db7f374e414f94657c138e6993cbfc5dcc58651f
-- ARROW_THRIFT_BUILD_VERSION: 0.13.0
-- ARROW_THRIFT_BUILD_SHA256_CHECKSUM: 7ad348b88033af46ce49148097afe354d513c1fca7c607b59c33ebb6064b5179
-- ARROW_UTF8PROC_BUILD_VERSION: v2.6.1
-- ARROW_UTF8PROC_BUILD_SHA256_CHECKSUM: 4c06a9dc4017e8a2438ef80ee371d45868bda2237a98b26554de7a95406b283b
-- ARROW_XSIMD_BUILD_VERSION: aeec9c872c8b475dedd7781336710f2dd2666cb2
-- ARROW_XSIMD_BUILD_SHA256_CHECKSUM: 0a841e6c8acf216150e4fc19fca8e29fbab9614b56ac7b96e56019264ca27b26
-- ARROW_ZLIB_BUILD_VERSION: 1.2.11
-- ARROW_ZLIB_BUILD_SHA256_CHECKSUM: c3e5e9fdd5004dcb542feda5ee4f0ff0744628baf8ed2dd5d66f8ca1197cb1a1
-- ARROW_ZSTD_BUILD_VERSION: v1.5.0
-- ARROW_ZSTD_BUILD_SHA256_CHECKSUM: 0d9ade222c64e912d6957b11c923e214e2e010a18f39bec102f572e693ba2867
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Check if compiler accepts -pthread
-- Check if compiler accepts -pthread - yes
-- Found Threads: TRUE
-- Looking for __SIZEOF_INT128__
-- Looking for __SIZEOF_INT128__ - found
-- Building without OpenSSL support. Minimum OpenSSL version 1.0.2 required.
-- Found hdfs.h at: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/tools/cpp/thirdparty/hadoop/include/hdfs.h
-- All bundled static libraries:
-- CMAKE_C_FLAGS:  -O3 -DNDEBUG  -Wall -fno-semantic-interposition
-- CMAKE_CXX_FLAGS:  -Wno-noexcept-type -Wno-subobject-linkage  -fdiagnostics-color=always -O3 -DNDEBUG  -Wall -fno-semantic-interposition
-- Looking for backtrace
-- Looking for backtrace - found
-- backtrace facility detected in default set of libraries
-- Found Backtrace: /usr/include
-- ---------------------------------------------------------------------
-- Arrow version:                                 6.0.1
--
-- Build configuration summary:
--   Generator: Unix Makefiles
--   Build type: RELEASE
--   Source directory: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/tools/cpp
--   Install prefix: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1
--
-- Compile and link options:
--
--   ARROW_CXXFLAGS="" [default=""]
--       Compiler flags to append when compiling Arrow
--   ARROW_BUILD_STATIC=ON [default=ON]
--       Build static libraries
--   ARROW_BUILD_SHARED=OFF [default=ON]
--       Build shared libraries
--   ARROW_PACKAGE_KIND="" [default=""]
--       Arbitrary string that identifies the kind of package
--       (for informational purposes)
--   ARROW_GIT_ID="" [default=""]
--       The Arrow git commit id (if any)
--   ARROW_GIT_DESCRIPTION="" [default=""]
--       The Arrow git commit description (if any)
--   ARROW_NO_DEPRECATED_API=OFF [default=OFF]
--       Exclude deprecated APIs from build
--   ARROW_USE_CCACHE=ON [default=ON]
--       Use ccache when compiling (if available)
--   ARROW_USE_LD_GOLD=OFF [default=OFF]
--       Use ld.gold for linking on Linux (if available)
--   ARROW_USE_PRECOMPILED_HEADERS=OFF [default=OFF]
--       Use precompiled headers when compiling
--   ARROW_SIMD_LEVEL=NONE [default=NONE|SSE4_2|AVX2|AVX512|NEON|DEFAULT]
--       Compile-time SIMD optimization level
--   ARROW_RUNTIME_SIMD_LEVEL=NONE [default=NONE|SSE4_2|AVX2|AVX512|MAX]
--       Max runtime SIMD optimization level
--   ARROW_ARMV8_ARCH=armv8-a [default=armv8-a|armv8-a+crc+crypto]
--       Arm64 arch and extensions
--   ARROW_ALTIVEC=ON [default=ON]
--       Build with Altivec if compiler has support
--   ARROW_RPATH_ORIGIN=OFF [default=OFF]
--       Build Arrow libraries with RATH set to $ORIGIN
--   ARROW_INSTALL_NAME_RPATH=ON [default=ON]
--       Build Arrow libraries with install_name set to @rpath
--   ARROW_GGDB_DEBUG=ON [default=ON]
--       Pass -ggdb flag to debug builds
--
-- Test and benchmark options:
--
--   ARROW_BUILD_EXAMPLES=OFF [default=OFF]
--       Build the Arrow examples
--   ARROW_BUILD_TESTS=OFF [default=OFF]
--       Build the Arrow googletest unit tests
--   ARROW_ENABLE_TIMING_TESTS=ON [default=ON]
--       Enable timing-sensitive tests
--   ARROW_BUILD_INTEGRATION=OFF [default=OFF]
--       Build the Arrow integration test executables
--   ARROW_BUILD_BENCHMARKS=OFF [default=OFF]
--       Build the Arrow micro benchmarks
--   ARROW_BUILD_BENCHMARKS_REFERENCE=OFF [default=OFF]
--       Build the Arrow micro reference benchmarks
--   ARROW_TEST_LINKAGE=static [default=shared|static]
--       Linkage of Arrow libraries with unit tests executables.
--   ARROW_FUZZING=OFF [default=OFF]
--       Build Arrow Fuzzing executables
--   ARROW_LARGE_MEMORY_TESTS=OFF [default=OFF]
--       Enable unit tests which use large memory
--
-- Lint options:
--
--   ARROW_ONLY_LINT=OFF [default=OFF]
--       Only define the lint and check-format targets
--   ARROW_VERBOSE_LINT=OFF [default=OFF]
--       If off, 'quiet' flags will be passed to linting tools
--   ARROW_GENERATE_COVERAGE=OFF [default=OFF]
--       Build with C++ code coverage enabled
--
-- Checks options:
--
--   ARROW_TEST_MEMCHECK=OFF [default=OFF]
--       Run the test suite using valgrind --tool=memcheck
--   ARROW_USE_ASAN=OFF [default=OFF]
--       Enable Address Sanitizer checks
--   ARROW_USE_TSAN=OFF [default=OFF]
--       Enable Thread Sanitizer checks
--   ARROW_USE_UBSAN=OFF [default=OFF]
--       Enable Undefined Behavior sanitizer checks
--
-- Project component options:
--
--   ARROW_BUILD_UTILITIES=OFF [default=OFF]
--       Build Arrow commandline utilities
--   ARROW_COMPUTE=ON [default=OFF]
--       Build the Arrow Compute Modules
--   ARROW_CSV=ON [default=OFF]
--       Build the Arrow CSV Parser Module
--   ARROW_CUDA=OFF [default=OFF]
--       Build the Arrow CUDA extensions (requires CUDA toolkit)
--   ARROW_DATASET=OFF [default=OFF]
--       Build the Arrow Dataset Modules
--   ARROW_FILESYSTEM=ON [default=OFF]
--       Build the Arrow Filesystem Layer
--   ARROW_FLIGHT=OFF [default=OFF]
--       Build the Arrow Flight RPC System (requires GRPC, Protocol Buffers)
--   ARROW_GANDIVA=OFF [default=OFF]
--       Build the Gandiva libraries
--   ARROW_GCS=OFF [default=OFF]
--       Build Arrow with GCS support (requires the GCloud SDK for C++)
--   ARROW_HDFS=OFF [default=OFF]
--       Build the Arrow HDFS bridge
--   ARROW_HIVESERVER2=OFF [default=OFF]
--       Build the HiveServer2 client and Arrow adapter
--   ARROW_IPC=ON [default=ON]
--       Build the Arrow IPC extensions
--   ARROW_JEMALLOC=OFF [default=ON]
--       Build the Arrow jemalloc-based allocator
--   ARROW_JNI=OFF [default=OFF]
--       Build the Arrow JNI lib
--   ARROW_JSON=OFF [default=OFF]
--       Build Arrow with JSON support (requires RapidJSON)
--   ARROW_MIMALLOC=OFF [default=OFF]
--       Build the Arrow mimalloc-based allocator
--   ARROW_PARQUET=OFF [default=OFF]
--       Build the Parquet libraries
--   ARROW_ORC=OFF [default=OFF]
--       Build the Arrow ORC adapter
--   ARROW_PLASMA=OFF [default=OFF]
--       Build the plasma object store along with Arrow
--   ARROW_PLASMA_JAVA_CLIENT=OFF [default=OFF]
--       Build the plasma object store java client
--   ARROW_PYTHON=OFF [default=OFF]
--       Build the Arrow CPython extensions
--   ARROW_S3=OFF [default=OFF]
--       Build Arrow with S3 support (requires the AWS SDK for C++)
--   ARROW_TENSORFLOW=OFF [default=OFF]
--       Build Arrow with TensorFlow support enabled
--   ARROW_TESTING=OFF [default=OFF]
--       Build the Arrow testing libraries
--
-- Thirdparty toolchain options:
--
--   ARROW_DEPENDENCY_SOURCE=BUNDLED [default=AUTO|BUNDLED|SYSTEM|CONDA|VCPKG|BREW]
--       Method to use for acquiring arrow's build dependencies
--   ARROW_VERBOSE_THIRDPARTY_BUILD=OFF [default=OFF]
--       Show output from ExternalProjects rather than just logging to files
--   ARROW_DEPENDENCY_USE_SHARED=ON [default=ON]
--       Link to shared libraries
--   ARROW_BOOST_USE_SHARED=OFF [default=ON]
--       Rely on boost shared libraries where relevant
--   ARROW_BROTLI_USE_SHARED=ON [default=ON]
--       Rely on Brotli shared libraries where relevant
--   ARROW_BZ2_USE_SHARED=ON [default=ON]
--       Rely on Bz2 shared libraries where relevant
--   ARROW_GFLAGS_USE_SHARED=ON [default=ON]
--       Rely on GFlags shared libraries where relevant
--   ARROW_GRPC_USE_SHARED=ON [default=ON]
--       Rely on gRPC shared libraries where relevant
--   ARROW_LZ4_USE_SHARED=ON [default=ON]
--       Rely on lz4 shared libraries where relevant
--   ARROW_OPENSSL_USE_SHARED=ON [default=ON]
--       Rely on OpenSSL shared libraries where relevant
--   ARROW_PROTOBUF_USE_SHARED=ON [default=ON]
--       Rely on Protocol Buffers shared libraries where relevant
--   ARROW_THRIFT_USE_SHARED=ON [default=ON]
--       Rely on thrift shared libraries where relevant
--   ARROW_UTF8PROC_USE_SHARED=ON [default=ON]
--       Rely on utf8proc shared libraries where relevant
--   ARROW_SNAPPY_USE_SHARED=ON [default=ON]
--       Rely on snappy shared libraries where relevant
--   ARROW_UTF8PROC_USE_SHARED=ON [default=ON]
--       Rely on utf8proc shared libraries where relevant
--   ARROW_ZSTD_USE_SHARED=ON [default=ON]
--       Rely on zstd shared libraries where relevant
--   ARROW_USE_GLOG=OFF [default=OFF]
--       Build libraries with glog support for pluggable logging
--   ARROW_WITH_BACKTRACE=ON [default=ON]
--       Build with backtrace support
--   ARROW_WITH_BROTLI=OFF [default=OFF]
--       Build with Brotli compression
--   ARROW_WITH_BZ2=OFF [default=OFF]
--       Build with BZ2 compression
--   ARROW_WITH_LZ4=OFF [default=OFF]
--       Build with lz4 compression
--   ARROW_WITH_SNAPPY=OFF [default=OFF]
--       Build with Snappy compression
--   ARROW_WITH_ZLIB=OFF [default=OFF]
--       Build with zlib compression
--   ARROW_WITH_ZSTD=OFF [default=OFF]
--       Build with zstd compression
--   ARROW_WITH_UTF8PROC=OFF [default=ON]
--       Build with support for Unicode properties using the utf8proc library
--       (only used if ARROW_COMPUTE is ON or ARROW_GANDIVA is ON)
--   ARROW_WITH_RE2=OFF [default=ON]
--       Build with support for regular expressions using the re2 library
--       (only used if ARROW_COMPUTE or ARROW_GANDIVA is ON)
--
-- Parquet options:
--
--   PARQUET_MINIMAL_DEPENDENCY=OFF [default=OFF]
--       Depend only on Thirdparty headers to build libparquet.
--       Always OFF if building binaries
--   PARQUET_BUILD_EXECUTABLES=OFF [default=OFF]
--       Build the Parquet executable CLI tools. Requires static libraries to be built.
--   PARQUET_BUILD_EXAMPLES=OFF [default=OFF]
--       Build the Parquet examples. Requires static libraries to be built.
--   PARQUET_REQUIRE_ENCRYPTION=OFF [default=OFF]
--       Build support for encryption. Fail if OpenSSL is not found
--
-- Gandiva options:
--
--   ARROW_GANDIVA_JAVA=OFF [default=OFF]
--       Build the Gandiva JNI wrappers
--   ARROW_GANDIVA_STATIC_LIBSTDCPP=OFF [default=OFF]
--       Include -static-libstdc++ -static-libgcc when linking with
--       Gandiva static libraries
--   ARROW_GANDIVA_PC_CXX_FLAGS="" [default=""]
--       Compiler flags to append when pre-compiling Gandiva operations
--
-- Advanced developer options:
--
--   ARROW_EXTRA_ERROR_CONTEXT=OFF [default=OFF]
--       Compile with extra error context (line numbers, code)
--   ARROW_OPTIONAL_INSTALL=OFF [default=OFF]
--       If enabled install ONLY targets that have already been built. Please be
--       advised that if this is enabled 'install' will fail silently on components
--       that have not been built
--   Outputting build configuration summary to /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpMj8ijC/file3ea2a7cc49d60/cmake_summary.json
-- Configuring done
-- Generating done
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-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/vendored/double-conversion/strtod.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/vendored/double-conversion/utils.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/csv/api.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/csv/chunker.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/csv/column_builder.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/csv/column_decoder.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/csv/converter.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/csv/invalid_row.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/csv/options.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/csv/parser.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/csv/reader.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/csv/test_common.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/csv/type_fwd.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/csv/writer.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/lib/pkgconfig/arrow-csv.pc
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/api.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/api_aggregate.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/api_scalar.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/api_vector.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/cast.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/exec.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/function.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/kernel.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/registry.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/type_fwd.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/lib/pkgconfig/arrow-compute.pc
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/exec/exec_plan.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/exec/expression.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/exec/hash_join.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/exec/hash_join_dict.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/exec/key_compare.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/exec/key_encode.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/exec/key_hash.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/exec/key_map.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/exec/options.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/exec/order_by_impl.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/exec/schema_util.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/exec/task_util.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/exec/test_util.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/compute/exec/util.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/filesystem/api.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/filesystem/filesystem.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/filesystem/gcsfs.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/filesystem/hdfs.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/filesystem/localfs.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/filesystem/mockfs.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/filesystem/path_util.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/filesystem/s3_test_util.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/filesystem/s3fs.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/filesystem/test_util.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/filesystem/type_fwd.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/lib/pkgconfig/arrow-filesystem.pc
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/ipc/api.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/ipc/dictionary.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/ipc/feather.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/ipc/json_simple.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/ipc/message.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/ipc/options.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/ipc/reader.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/ipc/test_common.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/ipc/type_fwd.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/ipc/util.h
-- Installing: /var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include/arrow/ipc/writer.h
+ popd
/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow
PKG_CFLAGS=-I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW
PKG_LIBS=-L/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/lib -larrow -larrow
** libs
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c RTasks.cpp -o RTasks.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c altrep.cpp -o altrep.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c array.cpp -o array.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c array_to_vector.cpp -o array_to_vector.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c arraydata.cpp -o arraydata.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c arrowExports.cpp -o arrowExports.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c buffer.cpp -o buffer.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c chunkedarray.cpp -o chunkedarray.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c compression.cpp -o compression.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c compute-exec.cpp -o compute-exec.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c compute.cpp -o compute.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c config.cpp -o config.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c csv.cpp -o csv.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c dataset.cpp -o dataset.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c datatype.cpp -o datatype.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c expression.cpp -o expression.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c feather.cpp -o feather.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c field.cpp -o field.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c filesystem.cpp -o filesystem.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c imports.cpp -o imports.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c io.cpp -o io.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c json.cpp -o json.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c memorypool.cpp -o memorypool.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c message.cpp -o message.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c parquet.cpp -o parquet.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c py-to-r.cpp -o py-to-r.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c r_to_arrow.cpp -o r_to_arrow.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c recordbatch.cpp -o recordbatch.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c recordbatchreader.cpp -o recordbatchreader.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c recordbatchwriter.cpp -o recordbatchwriter.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c scalar.cpp -o scalar.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c schema.cpp -o schema.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c symbols.cpp -o symbols.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c table.cpp -o table.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c threadpool.cpp -o threadpool.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -I/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/include  -DARROW_R_WITH_ARROW -I../inst/include/  -I/usr/local/include  -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mtune=generic  -c type_infer.cpp -o type_infer.o
g++ -m64 -std=gnu++11 -shared -L/usr/lib64/R/lib -Wl,-z,relro -o arrow.so RTasks.o altrep.o array.o array_to_vector.o arraydata.o arrowExports.o buffer.o chunkedarray.o compression.o compute-exec.o compute.o config.o csv.o dataset.o datatype.o expression.o feather.o field.o filesystem.o imports.o io.o json.o memorypool.o message.o parquet.o py-to-r.o r_to_arrow.o recordbatch.o recordbatchreader.o recordbatchwriter.o scalar.o schema.o symbols.o table.o threadpool.o type_infer.o -L/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpebpK6h/R.INSTALL3e8af7f82649d/arrow/libarrow/arrow-6.0.1/lib -larrow -larrow -L/usr/lib64/R/lib -lR
installing to /var/opt/sas/sasconfig/Lev1/__R_TEST/__R3/00LOCK-arrow/00new/arrow/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘arrow’
    finding HTML links ... done
    ArrayData                               html
    ChunkedArray                            html
    Codec                                   html
    CsvReadOptions                          html
    CsvTableReader                          html
    DataType                                html
    Dataset                                 html
    DictionaryType                          html
    Expression                              html
    FeatherReader                           html
    Field                                   html
    FileFormat                              html
    FileInfo                                html
    FileSelector                            html
    FileSystem                              html
    FileWriteOptions                        html
    FixedWidthType                          html
    FragmentScanOptions                     html
    InputStream                             html
    MemoryPool                              html
    Message                                 html
    MessageReader                           html
    OutputStream                            html
    ParquetArrowReaderProperties            html
    ParquetFileReader                       html
    ParquetFileWriter                       html
    ParquetWriterProperties                 html
    Partitioning                            html
    RecordBatch                             html
    RecordBatchReader                       html
    RecordBatchWriter                       html
    Scalar                                  html
    Scanner                                 html
    Schema                                  html
    Table                                   html
    array                                   html
    arrow-package                           html
    arrow_available                         html
    arrow_info                              html
    buffer                                  html
    call_function                           html
    cast_options                            html
    codec_is_available                      html
    compression                             html
    contains_regex                          html
    copy_files                              html
    cpu_count                               html
    create_package_with_all_dependencies    html
    data-type                               html
    dataset_factory                         html
    default_memory_pool                     html
    dictionary                              html
    enums                                   html
    flight_connect                          html
    flight_get                              html
    flight_put                              html
    get_stringr_pattern_options             html
    hive_partition                          html
    install_arrow                           html
    install_pyarrow                         html
    io_thread_count                         html
    list_compute_functions                  html
    list_flights                            html
    load_flight_server                      html
    make_readable_file                      html
    map_batches                             html
    match_arrow                             html
    mmap_create                             html
    mmap_open                               html
    open_dataset                            html
    read_delim_arrow                        html
    read_feather                            html
    read_ipc_stream                         html
    read_json_arrow                         html
    read_message                            html
    read_parquet                            html
    read_schema                             html
    recycle_scalars                         html
    reexports                               html
    repeat_value_as_array                   html
    s3_bucket                               html
    to_arrow                                html
    to_duckdb                               html
    type                                    html
    unify_schemas                           html
    value_counts                            html
    write_csv_arrow                         html
    write_dataset                           html
    write_feather                           html
    write_ipc_stream                        html
    write_parquet                           html
    write_to_raw                            html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (arrow)

The downloaded source packages are in
        ‘/var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp7kLuTv/downloaded_packages’
> library(arrow)
See arrow_info() for available features

Attaching package: ‘arrow’

The following object is masked from ‘package:utils’:

    timestamp

> write_parquet(iris, '/tmp/iris.parquet')
Error in parquet___WriterProperties___Builder__create() :
  Cannot call parquet___WriterProperties___Builder__create(). See https://arrow.apache.org/docs/r/articles/install.html for help installing Arrow C++ libraries.

Reporter: Maximilian König

Original Issue Attachments:

• screenshot-1.png
• screenshot-2.png
• screenshot-3.png

_{Note: This issue was originally created as ARROW-15000. Please see the migration documentation for further details.}

[asfimport]

Nicola Crane / @thisisnic: Hi [~max_koe], thanks for reporting this in such excellent detail.

Looking at the environment variables you have set, I think you are following the path mentioned in the installation guide which results in using devtoolset and building Arrow from source.

It's the internet connection piece that I think is causing complications here. When installing the arrow package from source, pkgconfig is used to find the relevant dependencies on the system, but the instructions for compiling with devtoolset disable this. I think this is so that we can ensure that everything has been compiled using devtoolset and so that there aren't any mismatches between compilers.

When not using pkgconfig to find dependencies, a number of the Arrow C++ dependencies require downloading from the internet, and so the installation process here has only installed the components which can be installed without an internet connection, which is the reason for the parquet writing failing.

There are potentially a few possible solutions; I think they are:

1. you could set set CC=/usr/bin/gcc and CXX=/usr/bin/g++ to use the system compilers and then set LIBARROW_BINARY and ARROW_USE_PKG_CONFIG both to true to download a binary package, or
2. you could follow the steps here for doing an offline build and so bundling up the source dependencies: https://arrow.apache.org/docs/r/articles/install.html#offline-installation

I'll check with some others to see if there's anything else to suggest.

[asfimport]

Maximilian König: Hello and thanks for checking back in on my Issue.

I have questions regarding your points:

RE 1.) Should I not use the devtoolset when doing this, because then my install fails because the native compiler seems to not have multilib support? As long as I have activated the devtoolset the /usr/bin/{gcc,g++} link to the activated compilers anywas as far as I understand.

RE 2.) I do not have a comparable RHEL-Machine with internet access. I could create an AWS-RHEL instance but it would differ in several aspects from my target system. Would this be good enough to try this or does this seem pointless to you?

 

Further Question: Is there maybe a way to supply the third party dependencies manually? Looking back at the output, it looks a bit as if parquet support is part of these dependencies (... ARROW_PARQUET='OFF' ...)

 

EDIT: When I do not use the devtools environment I get the following error output. As mentioned before my google-fu indicated that it is caused by not having proper g++-multilib support installed

* installing *source* package ‘arrow’ ...
** package ‘arrow’ successfully unpacked and MD5 sums checked
** using staged installation
trying URL 'https://github.com'
Error in download.file(from_url, to_file, quiet = quietly) :
  cannot open URL 'https://github.com'
*** Found local C++ source: 'tools/cpp'
*** Building C++ libraries
*** Building with MAKEFLAGS= -j2
*** Building C++ library from source, but downloading thirdparty dependencies
    is not possible, so this build will turn off all thirdparty features.
    See install vignette for details:
    https://cran.r-project.org/web/packages/arrow/vignettes/install.html
**** arrow with SOURCE_DIR='tools/cpp' BUILD_DIR='/var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp0rE0Ey/filec416a7bea6e31' DEST_DIR='libarrow/arrow-6.0.1' CMAKE='/opt/shared/operations/tmp/a_504k5/cmake3/cmake-3.22.0-linux-x86_64/bin/cmake' EXTRA_CMAKE_FLAGS=' -DARROW_SIMD_LEVEL=NONE -DARROW_RUNTIME_SIMD_LEVEL=NONE' CC='gcc -m64 -std=gnu99' CXX='g++ -m64 -std=gnu++11' LDFLAGS='-Wl,-z,relro' ARROW_S3='OFF' ARROW_MIMALLOC='OFF' ARROW_JEMALLOC='OFF' ARROW_JSON='OFF' ARROW_PARQUET='OFF' ARROW_DATASET='OFF' ARROW_WITH_BROTLI='OFF' ARROW_WITH_BZ2='OFF' ARROW_WITH_LZ4='OFF' ARROW_WITH_SNAPPY='OFF' ARROW_WITH_ZLIB='OFF' ARROW_WITH_ZSTD='OFF' ARROW_WITH_RE2='OFF' ARROW_WITH_UTF8PROC='OFF'
++ pwd
+ : /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmpz8ZKoj/R.INSTALLc4060d4a94cf/arrow
+ : tools/cpp
+ : /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp0rE0Ey/filec416a7bea6e31
+ : libarrow/arrow-6.0.1
+ : /opt/shared/operations/tmp/a_504k5/cmake3/cmake-3.22.0-linux-x86_64/bin/cmake
++ cd tools/cpp
++ pwd
+ SOURCE_DIR=/var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmpz8ZKoj/R.INSTALLc4060d4a94cf/arrow/tools/cpp
++ mkdir -p libarrow/arrow-6.0.1
++ cd libarrow/arrow-6.0.1
++ pwd
+ DEST_DIR=/var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmpz8ZKoj/R.INSTALLc4060d4a94cf/arrow/libarrow/arrow-6.0.1
+ '[' '' '!=' '' ']'
+ '[' '' = false ']'
+ ARROW_DEFAULT_PARAM=OFF
+ mkdir -p /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp0rE0Ey/filec416a7bea6e31
+ pushd /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp0rE0Ey/filec416a7bea6e31
/var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp0rE0Ey/filec416a7bea6e31 /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmpz8ZKoj/R.INSTALLc4060d4a94cf/arrow
+ /opt/shared/operations/tmp/a_504k5/cmake3/cmake-3.22.0-linux-x86_64/bin/cmake -DARROW_BOOST_USE_SHARED=OFF -DARROW_BUILD_TESTS=OFF -DARROW_BUILD_SHARED=OFF -DARROW_BUILD_STATIC=ON -DARROW_COMPUTE=ON -DARROW_CSV=ON -DARROW_DATASET=OFF -DARROW_DEPENDENCY_SOURCE=BUNDLED -DAWSSDK_SOURCE= -DARROW_FILESYSTEM=ON -DARROW_JEMALLOC=OFF -DARROW_MIMALLOC=OFF -DARROW_JSON=OFF -DARROW_PARQUET=OFF -DARROW_S3=OFF -DARROW_WITH_BROTLI=OFF -DARROW_WITH_BZ2=OFF -DARROW_WITH_LZ4=OFF -DARROW_WITH_RE2=OFF -DARROW_WITH_SNAPPY=OFF -DARROW_WITH_UTF8PROC=OFF -DARROW_WITH_ZLIB=OFF -DARROW_WITH_ZSTD=OFF -DARROW_VERBOSE_THIRDPARTY_BUILD=OFF -DCMAKE_BUILD_TYPE=Release -DCMAKE_INSTALL_LIBDIR=lib -DCMAKE_INSTALL_PREFIX=/var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmpz8ZKoj/R.INSTALLc4060d4a94cf/arrow/libarrow/arrow-6.0.1 -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_UNITY_BUILD=ON -DARROW_SIMD_LEVEL=NONE -DARROW_RUNTIME_SIMD_LEVEL=NONE -G 'Unix Makefiles' /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmpz8ZKoj/R.INSTALLc4060d4a94cf/arrow/tools/cpp
-- Building using CMake version: 3.22.0
-- The C compiler identification is GNU 4.8.5
-- The CXX compiler identification is GNU 4.8.5
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Arrow version: 6.0.1 (full: '6.0.1')
-- Arrow SO version: 600 (full: 600.1.0)
-- clang-tidy not found
-- clang-format not found
-- Could NOT find ClangTools (missing: CLANG_FORMAT_BIN CLANG_TIDY_BIN)
-- infer not found
fatal: not a git repository (or any parent up to mount point /var/opt/sas)
Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set).
-- Found Python3: /usr/bin/python3.6 (found version "3.6.8") found components: Interpreter
-- Found cpplint executable at /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmpz8ZKoj/R.INSTALLc4060d4a94cf/arrow/tools/cpp/build-support/cpplint.py
-- System processor: x86_64
-- Performing Test CXX_SUPPORTS_SSE4_2
-- Performing Test CXX_SUPPORTS_SSE4_2 - Success
-- Performing Test CXX_SUPPORTS_AVX2
-- Performing Test CXX_SUPPORTS_AVX2 - Failed
-- Performing Test CXX_SUPPORTS_AVX512
-- Performing Test CXX_SUPPORTS_AVX512 - Failed
-- Arrow build warning level: PRODUCTION
Using ld linker
Configured for RELEASE build (set with cmake -DCMAKE_BUILD_TYPE={release,debug,...})
-- Build Type: RELEASE
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-- Looking for pthread.h
-- Looking for pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Check if compiler accepts -pthread
-- Check if compiler accepts -pthread - yes
-- Found Threads: TRUE
-- Looking for __SIZEOF_INT128__
-- Looking for __SIZEOF_INT128__ - found
-- Building without OpenSSL support. Minimum OpenSSL version 1.0.2 required.
-- Found hdfs.h at: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmpz8ZKoj/R.INSTALLc4060d4a94cf/arrow/tools/cpp/thirdparty/hadoop/include/hdfs.h
-- All bundled static libraries:
-- CMAKE_C_FLAGS:  -O3 -DNDEBUG  -Wall -Wno-attributes
-- CMAKE_CXX_FLAGS:  -Wno-subobject-linkage  -O3 -DNDEBUG  -Wall -Wno-attributes
-- Looking for backtrace
-- Looking for backtrace - found
-- backtrace facility detected in default set of libraries
-- Found Backtrace: /usr/include
-- ---------------------------------------------------------------------
-- Arrow version:                                 6.0.1
--
-- Build configuration summary:
--   Generator: Unix Makefiles
--   Build type: RELEASE
--   Source directory: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmpz8ZKoj/R.INSTALLc4060d4a94cf/arrow/tools/cpp
--   Install prefix: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmpz8ZKoj/R.INSTALLc4060d4a94cf/arrow/libarrow/arrow-6.0.1
--
-- Compile and link options:
--
--   ARROW_CXXFLAGS="" [default=""]
--       Compiler flags to append when compiling Arrow
--   ARROW_BUILD_STATIC=ON [default=ON]
--       Build static libraries
--   ARROW_BUILD_SHARED=OFF [default=ON]
--       Build shared libraries
--   ARROW_PACKAGE_KIND="" [default=""]
--       Arbitrary string that identifies the kind of package
--       (for informational purposes)
--   ARROW_GIT_ID="" [default=""]
--       The Arrow git commit id (if any)
--   ARROW_GIT_DESCRIPTION="" [default=""]
--       The Arrow git commit description (if any)
--   ARROW_NO_DEPRECATED_API=OFF [default=OFF]
--       Exclude deprecated APIs from build
--   ARROW_USE_CCACHE=ON [default=ON]
--       Use ccache when compiling (if available)
--   ARROW_USE_LD_GOLD=OFF [default=OFF]
--       Use ld.gold for linking on Linux (if available)
--   ARROW_USE_PRECOMPILED_HEADERS=OFF [default=OFF]
--       Use precompiled headers when compiling
--   ARROW_SIMD_LEVEL=NONE [default=NONE|SSE4_2|AVX2|AVX512|NEON|DEFAULT]
--       Compile-time SIMD optimization level
--   ARROW_RUNTIME_SIMD_LEVEL=NONE [default=NONE|SSE4_2|AVX2|AVX512|MAX]
--       Max runtime SIMD optimization level
--   ARROW_ARMV8_ARCH=armv8-a [default=armv8-a|armv8-a+crc+crypto]
--       Arm64 arch and extensions
--   ARROW_ALTIVEC=ON [default=ON]
--       Build with Altivec if compiler has support
--   ARROW_RPATH_ORIGIN=OFF [default=OFF]
--       Build Arrow libraries with RATH set to $ORIGIN
--   ARROW_INSTALL_NAME_RPATH=ON [default=ON]
--       Build Arrow libraries with install_name set to @rpath
--   ARROW_GGDB_DEBUG=ON [default=ON]
--       Pass -ggdb flag to debug builds
--
-- Test and benchmark options:
--
--   ARROW_BUILD_EXAMPLES=OFF [default=OFF]
--       Build the Arrow examples
--   ARROW_BUILD_TESTS=OFF [default=OFF]
--       Build the Arrow googletest unit tests
--   ARROW_ENABLE_TIMING_TESTS=ON [default=ON]
--       Enable timing-sensitive tests
--   ARROW_BUILD_INTEGRATION=OFF [default=OFF]
--       Build the Arrow integration test executables
--   ARROW_BUILD_BENCHMARKS=OFF [default=OFF]
--       Build the Arrow micro benchmarks
--   ARROW_BUILD_BENCHMARKS_REFERENCE=OFF [default=OFF]
--       Build the Arrow micro reference benchmarks
--   ARROW_TEST_LINKAGE=static [default=shared|static]
--       Linkage of Arrow libraries with unit tests executables.
--   ARROW_FUZZING=OFF [default=OFF]
--       Build Arrow Fuzzing executables
--   ARROW_LARGE_MEMORY_TESTS=OFF [default=OFF]
--       Enable unit tests which use large memory
--
-- Lint options:
--
--   ARROW_ONLY_LINT=OFF [default=OFF]
--       Only define the lint and check-format targets
--   ARROW_VERBOSE_LINT=OFF [default=OFF]
--       If off, 'quiet' flags will be passed to linting tools
--   ARROW_GENERATE_COVERAGE=OFF [default=OFF]
--       Build with C++ code coverage enabled
--
-- Checks options:
--
--   ARROW_TEST_MEMCHECK=OFF [default=OFF]
--       Run the test suite using valgrind --tool=memcheck
--   ARROW_USE_ASAN=OFF [default=OFF]
--       Enable Address Sanitizer checks
--   ARROW_USE_TSAN=OFF [default=OFF]
--       Enable Thread Sanitizer checks
--   ARROW_USE_UBSAN=OFF [default=OFF]
--       Enable Undefined Behavior sanitizer checks
--
-- Project component options:
--
--   ARROW_BUILD_UTILITIES=OFF [default=OFF]
--       Build Arrow commandline utilities
--   ARROW_COMPUTE=ON [default=OFF]
--       Build the Arrow Compute Modules
--   ARROW_CSV=ON [default=OFF]
--       Build the Arrow CSV Parser Module
--   ARROW_CUDA=OFF [default=OFF]
--       Build the Arrow CUDA extensions (requires CUDA toolkit)
--   ARROW_DATASET=OFF [default=OFF]
--       Build the Arrow Dataset Modules
--   ARROW_FILESYSTEM=ON [default=OFF]
--       Build the Arrow Filesystem Layer
--   ARROW_FLIGHT=OFF [default=OFF]
--       Build the Arrow Flight RPC System (requires GRPC, Protocol Buffers)
--   ARROW_GANDIVA=OFF [default=OFF]
--       Build the Gandiva libraries
--   ARROW_GCS=OFF [default=OFF]
--       Build Arrow with GCS support (requires the GCloud SDK for C++)
--   ARROW_HDFS=OFF [default=OFF]
--       Build the Arrow HDFS bridge
--   ARROW_HIVESERVER2=OFF [default=OFF]
--       Build the HiveServer2 client and Arrow adapter
--   ARROW_IPC=ON [default=ON]
--       Build the Arrow IPC extensions
--   ARROW_JEMALLOC=OFF [default=ON]
--       Build the Arrow jemalloc-based allocator
--   ARROW_JNI=OFF [default=OFF]
--       Build the Arrow JNI lib
--   ARROW_JSON=OFF [default=OFF]
--       Build Arrow with JSON support (requires RapidJSON)
--   ARROW_MIMALLOC=OFF [default=OFF]
--       Build the Arrow mimalloc-based allocator
--   ARROW_PARQUET=OFF [default=OFF]
--       Build the Parquet libraries
--   ARROW_ORC=OFF [default=OFF]
--       Build the Arrow ORC adapter
--   ARROW_PLASMA=OFF [default=OFF]
--       Build the plasma object store along with Arrow
--   ARROW_PLASMA_JAVA_CLIENT=OFF [default=OFF]
--       Build the plasma object store java client
--   ARROW_PYTHON=OFF [default=OFF]
--       Build the Arrow CPython extensions
--   ARROW_S3=OFF [default=OFF]
--       Build Arrow with S3 support (requires the AWS SDK for C++)
--   ARROW_TENSORFLOW=OFF [default=OFF]
--       Build Arrow with TensorFlow support enabled
--   ARROW_TESTING=OFF [default=OFF]
--       Build the Arrow testing libraries
--
-- Thirdparty toolchain options:
--
--   ARROW_DEPENDENCY_SOURCE=BUNDLED [default=AUTO|BUNDLED|SYSTEM|CONDA|VCPKG|BREW]
--       Method to use for acquiring arrow's build dependencies
--   ARROW_VERBOSE_THIRDPARTY_BUILD=OFF [default=OFF]
--       Show output from ExternalProjects rather than just logging to files
--   ARROW_DEPENDENCY_USE_SHARED=ON [default=ON]
--       Link to shared libraries
--   ARROW_BOOST_USE_SHARED=OFF [default=ON]
--       Rely on boost shared libraries where relevant
--   ARROW_BROTLI_USE_SHARED=ON [default=ON]
--       Rely on Brotli shared libraries where relevant
--   ARROW_BZ2_USE_SHARED=ON [default=ON]
--       Rely on Bz2 shared libraries where relevant
--   ARROW_GFLAGS_USE_SHARED=ON [default=ON]
--       Rely on GFlags shared libraries where relevant
--   ARROW_GRPC_USE_SHARED=ON [default=ON]
--       Rely on gRPC shared libraries where relevant
--   ARROW_LZ4_USE_SHARED=ON [default=ON]
--       Rely on lz4 shared libraries where relevant
--   ARROW_OPENSSL_USE_SHARED=ON [default=ON]
--       Rely on OpenSSL shared libraries where relevant
--   ARROW_PROTOBUF_USE_SHARED=ON [default=ON]
--       Rely on Protocol Buffers shared libraries where relevant
--   ARROW_THRIFT_USE_SHARED=ON [default=ON]
--       Rely on thrift shared libraries where relevant
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--       Rely on utf8proc shared libraries where relevant
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--       Rely on snappy shared libraries where relevant
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--       Rely on utf8proc shared libraries where relevant
--   ARROW_ZSTD_USE_SHARED=ON [default=ON]
--       Rely on zstd shared libraries where relevant
--   ARROW_USE_GLOG=OFF [default=OFF]
--       Build libraries with glog support for pluggable logging
--   ARROW_WITH_BACKTRACE=ON [default=ON]
--       Build with backtrace support
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--       Build with Brotli compression
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--       Build with BZ2 compression
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--       Build with lz4 compression
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--       Build with Snappy compression
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--       Build with zlib compression
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--       Build with zstd compression
--   ARROW_WITH_UTF8PROC=OFF [default=ON]
--       Build with support for Unicode properties using the utf8proc library
--       (only used if ARROW_COMPUTE is ON or ARROW_GANDIVA is ON)
--   ARROW_WITH_RE2=OFF [default=ON]
--       Build with support for regular expressions using the re2 library
--       (only used if ARROW_COMPUTE or ARROW_GANDIVA is ON)
--
-- Parquet options:
--
--   PARQUET_MINIMAL_DEPENDENCY=OFF [default=OFF]
--       Depend only on Thirdparty headers to build libparquet.
--       Always OFF if building binaries
--   PARQUET_BUILD_EXECUTABLES=OFF [default=OFF]
--       Build the Parquet executable CLI tools. Requires static libraries to be built.
--   PARQUET_BUILD_EXAMPLES=OFF [default=OFF]
--       Build the Parquet examples. Requires static libraries to be built.
--   PARQUET_REQUIRE_ENCRYPTION=OFF [default=OFF]
--       Build support for encryption. Fail if OpenSSL is not found
--
-- Gandiva options:
--
--   ARROW_GANDIVA_JAVA=OFF [default=OFF]
--       Build the Gandiva JNI wrappers
--   ARROW_GANDIVA_STATIC_LIBSTDCPP=OFF [default=OFF]
--       Include -static-libstdc++ -static-libgcc when linking with
--       Gandiva static libraries
--   ARROW_GANDIVA_PC_CXX_FLAGS="" [default=""]
--       Compiler flags to append when pre-compiling Gandiva operations
--
-- Advanced developer options:
--
--   ARROW_EXTRA_ERROR_CONTEXT=OFF [default=OFF]
--       Compile with extra error context (line numbers, code)
--   ARROW_OPTIONAL_INSTALL=OFF [default=OFF]
--       If enabled install ONLY targets that have already been built. Please be
--       advised that if this is enabled 'install' will fail silently on components
--       that have not been built
--   Outputting build configuration summary to /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp0rE0Ey/filec416a7bea6e31/cmake_summary.json
-- Configuring done
-- Generating done
-- Build files have been written to: /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp0rE0Ey/filec416a7bea6e31
+ /opt/shared/operations/tmp/a_504k5/cmake3/cmake-3.22.0-linux-x86_64/bin/cmake --build . --target install
[  0%] Built target toolchain
[  0%] Built target arrow_dependencies
[  3%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_20_cxx.cxx.o
[  7%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_21_cxx.cxx.o
In file included from /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmpz8ZKoj/R.INSTALLc4060d4a94cf/arrow/tools/cpp/src/arrow/filesystem/util_internal.h:20:0,
                 from /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmpz8ZKoj/R.INSTALLc4060d4a94cf/arrow/tools/cpp/src/arrow/filesystem/util_internal.cc:18,
                 from /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp0rE0Ey/filec416a7bea6e31/src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_21_cxx.cxx:3:
/usr/include/c++/4.8.2/cstdint:38:28: fatal error: bits/c++config.h: No such file or directory
 #include <bits/c++config.h>
                            ^
compilation terminated.
In file included from /usr/include/c++/4.8.2/memory:62:0,
                 from /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmpz8ZKoj/R.INSTALLc4060d4a94cf/arrow/tools/cpp/src/arrow/compute/exec/hash_join_dict.h:20,
                 from /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmpz8ZKoj/R.INSTALLc4060d4a94cf/arrow/tools/cpp/src/arrow/compute/exec/hash_join_dict.cc:18,
                 from /var/opt/sas/sasconfig/Lev1/__R_TEST/Rtmp0rE0Ey/filec416a7bea6e31/src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_20_cxx.cxx:3:
/usr/include/c++/4.8.2/bits/stl_algobase.h:59:28: fatal error: bits/c++config.h: No such file or directory
 #include <bits/c++config.h>
                            ^
compilation terminated.
make[2]: *** [src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_21_cxx.cxx.o] Error 1
make[2]: *** Waiting for unfinished jobs....
make[2]: *** [src/arrow/CMakeFiles/arrow_objlib.dir/Unity/unity_20_cxx.cxx.o] Error 1
make[1]: *** [src/arrow/CMakeFiles/arrow_objlib.dir/all] Error 2
gmake: *** [all] Error 2
**** Error building Arrow C++.
------------------------- NOTE ---------------------------
There was an issue preparing the Arrow C++ libraries.
See https://arrow.apache.org/docs/r/articles/install.html
---------------------------------------------------------
ERROR: configuration failed for package ‘arrow’
* removing ‘/var/opt/sas/sasconfig/Lev1/__R_TEST/__R4/arrow’The downloaded source packages are in
        ‘/var/opt/sas/sasconfig/Lev1/__R_TEST/RtmpqtDtv3/downloaded_packages’
Warning message:
In install.packages("arrow", "/var/opt/sas/sasconfig/Lev1/__R_TEST/__R4") :
  installation of package ‘arrow’ had non-zero exit status
> 

[asfimport]

Neal Richardson / @nealrichardson: @thisisnic's suggestion #2 is correct. There is this message in the installation output:

*** Building C++ library from source, but downloading thirdparty dependencies
    is not possible, so this build will turn off all thirdparty features.
    See install vignette for details:
    https://cran.r-project.org/web/packages/arrow/vignettes/install.html

You want to create_package_with_all_dependencies() on a connected computer as the "Offline installation" suggests. This just downloads the dependencies into a single package, it does not compile or build anything, so it can be any computer, does not need to match your system configuration.

[asfimport]

Maximilian König: Thank you very much for your input, this resolved the problem.

 

I encountered different problems on the way, that slowed the progress significantly: Both on MacOS as well as on Windows 10 the function create_package_with_all_dependencies() did not function properly – both throwing different kinds of errors along the way –, so that I indeed had to set up AWS linux machines to use arrow with this function, and it had to be rather large machines at that to get it to fully compile.

[asfimport]

Nicola Crane / @thisisnic: Thanks for sticking with this, [~max_koe].

I don't suppose, if you still have access to the error logs, you'd mind posting them here? It'd be great to be able to inspect them and see if we need to change either the code itself or perhaps the instructions about which machines to compile on for future users. No worries if not though!

When you say "rather large", how large do you mean? I know there are some dependencies (e.g. Unity) which can lead to the need for higher resources, but I'd like to make sure there's nothing we've overlooked, if we do update the instructions.

[asfimport]

Maximilian König: I tried the installation both with t2.micro and t3.medium which are rather small and failed there. It worked with i3en.large – this one is sized comparably to a desktop PC I would say:

Type	Subtype	CPU (Cores)	Ram (GB)	I would suggest opening a new issue for the Errors on MacOS / Windows, and closing this one as it has been solved.

[asfimport]

Neal Richardson / @nealrichardson: create_package_with_all_dependencies() doesn't compile anything, it just downloads things and puts them into a single tarball: https://github.com/apache/arrow/blob/master/r/R/install-arrow.R#L191-L239

It should be platform independent though, so if it isn't, that should be fixed.

[asfimport]

Maximilian König: I am aware that the function does not compile anything. I was saying that installing the arrow-package on AWS-Linux-Servers did take larger machines to finish compiling. (before I could use the function inside the package).

For the downloading Issue on MacOS i created a separate Issue now: ARROW-15092

 

[asfimport]

Nicola Crane / @thisisnic: Thanks for opening that other ticket!