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NetBeans 18 Background Scanning of Projects doesn't ever complete, without throwing an Unexpected Exception #6256

Closed deterset closed 1 year ago

deterset commented 1 year ago

Apache NetBeans version

Apache NetBeans 18

What happened

Every time I try to use Net Beans 18 I get one or more Unexpected Exception errors. I started with JDK 18,Then Tried JDK 20 and right now I'm using JDK 17 All are showing the same error and the Background Scanning of Projects will never complete. It stops around 56%. The memory graph is also maxed out when it's showing errors.

Right now I am stuck using Netbeans 17

How to reproduce

All I have to do is open Netbeans and wait about 2 minuets or so.

Boom... Unexpected Exception

Did this work correctly in an earlier version?

Apache NetBeans 17

Operating System

Windows 11, 16Gig of RAM, 6 Core cpu

JDK

JDK 17 windows x64

Apache NetBeans packaging

Apache NetBeans provided installer

Anything else

It happens every time I open Netbeans 18 It never happens on version 17

I currently have 14 projects open. I closed several of them hoping it might help. in Netbeans 17 it shows I'm using 1.428 Gig of RAM.

Are you willing to submit a pull request?

No

asbachb commented 1 year ago

@deterset Normally you should be able to obtain the stacktrace in case an unexpected Exception occurs. Without a stacktrace it's quite hard to determine what's going on.

deterset commented 1 year ago

Working on getting a stack trace. Right now it getting to 65% and the background scan is just stopping. It's been over a hour now at 65%. I'm really not sure how to get a stacktrace but if it will help you I will try my best to get it. After it gets stuck some of the pop out menus don't work any more.

Unexpected_Exception

lkishalmi commented 1 year ago

Stacktrace and the file you are editing would be good. It seems there is a bug in the PHP lexer/parser.

deterset commented 1 year ago

ok more information. See attachment. I'm not sure what L:.config or L:\ is, or where it's coming from. It is not in the netbeans.conf file. Looks like it's running out of heap memory space.

netbeans_log.txt netbeans-Exception.txt

junichi11 commented 1 year ago

Maybe, not PHP but git. Can you try it without git?

Isn't "Show Details" shown? like this: nb-gh-6256-exception Warning_001

Exception_001

junichi11 commented 1 year ago

@deterset Could you write your exact steps to reproduce it? e.g.

  1. Create a file (test.php)
  2. Write the following code 
    <?php
// something
  3. ...
deterset commented 1 year ago

The "Show Details" results that are in the Exception window you show above are in the file netbeans-Exception.txt. There were 7 messages from my "Exception" Window. The last message was repeated 4 times.

The error happens by just opening netbeans 18, Opening netbeans 17 works just fine.

netbeans-error-b

junichi11 commented 1 year ago

The "Show Details" results that are in the Exception window you show above are in the file netbeans-Exception.txt. There were 7 messages from my "Exception" Window. The last message was repeated 4 times.

I think this is a problem related to Git.

Please try using NB19-rc3 whether that problem still occurs in it.

deterset commented 1 year ago

I don't thing GIT is installed in this version (see image 1). I'm not sure where to get NB19-rc3.

I did find out it's only 1 project causing the problem. If I close the project "Sales & Mix" and open netbeans 19 all works fine. Then when I open the project "Sales & Mix" is when I get the Unexpected Exception.

netbeans-plugins netbeans-error-c

junichi11 commented 1 year ago

I don't thing GIT is installed in this version (see image 1).

Please check "Show details".

I'm not sure where to get NB19-rc3.

https://lists.apache.org/thread/2f5lo6dkl2qkvvjfmpzlj16yvvb3o0fm

neilcsmith-net commented 1 year ago

The "public" link for release candidates is https://github.com/apache/netbeans/discussions/6225 or https://nightlies.apache.org/netbeans/candidate/netbeans/

deterset commented 1 year ago

Sorry NB19-r3 has the same issue. After opening the program and just waiting a few minuets I get these errors (see image) Also when I select a notification I do not get any details.

netbeans-error-d

lkishalmi commented 1 year ago

Would be really nice to attach the IDE log here!

deterset commented 1 year ago

Your wish is my command. The 1st link is the log file.

netbeans-18.txt

netbeans-18-error

lkishalmi commented 1 year ago

There is a View > IDE Log. That would open the IDE log in a window. The file is in your case would be: C:\Users\rlc\AppData\Roaming\NetBeans\18\var\log\messages.log

It also seems that there is at least 2 different issue here. One is an NPE, the other would be a Memory Leak.

The log files could give guidance for fixing the NPE, however the memory leak would need an object allocation history and maybe a memory dump.

The first 50 lines of jmap -histo <PID> would get the heap histogram.

deterset commented 1 year ago

In Addition this was on the console. I don't think I can attached the heapdump.hprof file because it is 3.66 Gb. If you need me to look for something in there I can try.

The launcher has determined that the parent process has a console and will reuse it for its own console output. Closing the console will result in termination of the running program. Use '--console suppress' to suppress console output. Use '--console new' to create a separate console window. WARNING: package com.apple.eio not in java.desktop WARNING: package sun.awt.X11 not in java.desktop WARNING: package com.sun.java.swing.plaf.gtk not in java.desktop WARNING: A terminally deprecated method in java.lang.System has been called WARNING: System::setSecurityManager has been called by org.netbeans.TopSecurityManager (file:/C:/Program%20Files/NetBeans-18/netbeans/platform/lib/boot.jar) WARNING: Please consider reporting this to the maintainers of org.netbeans.TopSecurityManager WARNING: System::setSecurityManager will be removed in a future release INFO: Could not find files for the given pattern(s). INFO: Could not find files for the given pattern(s). java.lang.OutOfMemoryError: Java heap space Dumping heap to C:\Users\rlc\AppData\Roaming\NetBeans\18\var\log\heapdump.hprof

deterset commented 1 year ago

Here is the IDE log you specified above.


-------------------------------------------------------------------------------
>Log Session: Thursday, August 3, 2023 at 2:08:32 PM Eastern Daylight Time
>System Info: 
  Product Version         = Apache NetBeans IDE 18
  Operating System        = Windows 11 version 10.0 running on amd64
  Java; VM; Vendor        = 17.0.8; Java HotSpot(TM) 64-Bit Server VM 17.0.8+9-LTS-211; Oracle Corporation
  Runtime                 = Java(TM) SE Runtime Environment 17.0.8+9-LTS-211
  Java Home               = C:\Program Files\Java\jdk-17
  System Locale; Encoding = en_US (nb); Cp1252
  Home Directory          = C:\Users\rlc
  Current Directory       = C:\Program Files\NetBeans-18\netbeans\bin
  User Directory          = C:\Users\rlc\AppData\Roaming\NetBeans\18
  Cache Directory         = C:\Users\rlc\AppData\Local\NetBeans\Cache\18
  Installation            = C:\Program Files\NetBeans-18\netbeans\nb
                            C:\Program Files\NetBeans-18\netbeans\ergonomics
                            C:\Program Files\NetBeans-18\netbeans\ide
                            C:\Program Files\NetBeans-18\netbeans\extide
                            C:\Program Files\NetBeans-18\netbeans\java
                            C:\Program Files\NetBeans-18\netbeans\apisupport
                            C:\Program Files\NetBeans-18\netbeans\webcommon
                            C:\Program Files\NetBeans-18\netbeans\websvccommon
                            C:\Program Files\NetBeans-18\netbeans\enterprise
                            C:\Program Files\NetBeans-18\netbeans\profiler
                            C:\Program Files\NetBeans-18\netbeans\php
                            C:\Program Files\NetBeans-18\netbeans\harness
                            C:\Program Files\NetBeans-18\netbeans\cpplite
                            C:\Program Files\NetBeans-18\netbeans\groovy
                            C:\Program Files\NetBeans-18\netbeans\javafx
                            C:\Program Files\NetBeans-18\netbeans\platform
  Boot & Ext. Classpath   = 
  Application Classpath   = C:\Program Files\NetBeans-18\netbeans\platform\lib\boot.jar;C:\Program Files\NetBeans-18\netbeans\platform\lib\org-openide-modules.jar;C:\Program Files\NetBeans-18\netbeans\platform\lib\org-openide-util-lookup.jar;C:\Program Files\NetBeans-18\netbeans\platform\lib\org-openide-util-ui.jar;C:\Program Files\NetBeans-18\netbeans\platform\lib\org-openide-util.jar
  Startup Classpath       = C:\Program Files\NetBeans-18\netbeans\platform\core\asm-9.5.jar;C:\Program Files\NetBeans-18\netbeans\platform\core\asm-commons-9.5.jar;C:\Program Files\NetBeans-18\netbeans\platform\core\asm-tree-9.5.jar;C:\Program Files\NetBeans-18\netbeans\platform\core\core-base.jar;C:\Program Files\NetBeans-18\netbeans\platform\core\core.jar;C:\Program Files\NetBeans-18\netbeans\platform\core\org-netbeans-libs-asm.jar;C:\Program Files\NetBeans-18\netbeans\platform\core\org-openide-filesystems-compat8.jar;C:\Program Files\NetBeans-18\netbeans\platform\core\org-openide-filesystems.jar;C:\Program Files\NetBeans-18\netbeans\nb\core\org-netbeans-upgrader.jar;C:\Program Files\NetBeans-18\netbeans\nb\core\locale\core_nb.jar
-------------------------------------------------------------------------------
INFO [org.netbeans.modules.netbinox]: Install area set to file:/C:/Program Files/NetBeans-18/netbeans/
WARNING [org.netbeans.core.modules]: the modules [org.netbeans.modules.xml.text] use org.netbeans.modules.editor.deprecated.pre65formatting which is deprecated.
WARNING [org.netbeans.core.modules]: the modules [org.netbeans.modules.ide.kit, org.netbeans.modules.xml.text] use org.netbeans.modules.editor.structure which is deprecated.
WARNING [org.netbeans.core.modules]: the modules [org.netbeans.modules.ant.hints, org.netbeans.modules.java.hints, org.netbeans.modules.jshell.support, org.netbeans.modules.maven.hints] use org.netbeans.modules.java.hints.legacy.spi which is deprecated: Use Java Hints SPI (org.netbeans.spi.java.hints) instead.
INFO [org.netbeans.core.startup.NbEvents]: Turning on modules:
    slf4j.jdk14 [1.7.36 1.7.36]
    slf4j.api [1.7.36 1.7.36]
    org.openide.util.lookup [8.54 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
    org.openide.util [9.28 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
    org.openide.util.ui [9.29 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
    org.openide.modules [7.68 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
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    org.openide.awt [7.88 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
    org.netbeans.api.progress/1 [1.68 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
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    org.netbeans.modules.debugger.jpda.jsui/1 [1.20 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
    org.netbeans.modules.debugger.jpda.kit [1.35 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
    org.netbeans.modules.debugger.jpda.heapwalk/1 [1.51 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
    org.netbeans.modules.css.prep [1.50 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
    org.netbeans.modules.cordova.platforms [1.56 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
    org.netbeans.modules.cordova.platforms.android [1.46 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
    org.netbeans.modules.cordova [1.53 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
    org.eclipse.mylyn.bugzilla.core [3.17.0 3.17.0.v20150828-2026]
    org.apache.commons.httpclient [3.1.0 3.1.0]
    org.netbeans.modules.bugzilla [1.97 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
    org.netbeans.modules.bugtracking.bridge [1.65 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
    org.netbeans.modules.ant.hints/1 [1.14 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
    org.netbeans.modules.ant.grammar/1 [1.64 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
    org.netbeans.libs.svnClientAdapter.javahl/1 [1.44 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
    org.netbeans.libs.nbjavacapi [20.0 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
    org.netbeans.libs.jna.platform/2 [2.15 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
    org.netbeans.libs.graaljs/2 [1.20 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
    org.netbeans.lib.nbjshell9 [1.19 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
    org.netbeans.core.network [1.32 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
    org.netbeans.core.nativeaccess/1 [1.51 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
    org.netbeans.core.io.ui/1 [1.50 18-7d33005615b3c744564f3d38ab9ef14bf8c3ec44]
    org.eclipse.mylyn.commons.xmlrpc [3.17.0 3.17.0.v20150625-2042]
    org.eclipse.mylyn.commons.repositories.core [1.9.0 1.9.0.v20150625-2042]
    org.eclipse.mylyn.commons.core [3.17.0 3.17.0.v20150625-2042]
    org.eclipse.equinox.security [1.1.1 1.1.1.R37x_v20110822-1018]
    org.eclipse.equinox.registry [3.5.200 3.5.200.v20120522-1841]
    org.eclipse.equinox.preferences [3.4.2 3.4.2.v20120111-2020]
    org.eclipse.equinox.app [1.3.100 1.3.100.v20110321]
    org.eclipse.core.runtime.compatibility.auth [3.2.200 3.2.200.v20110110]
    org.eclipse.core.net [1.2.100 1.2.100.I20110511-0800]
    org.eclipse.core.contenttype [3.4.100 3.4.100.v20110423-0524]
    org.apache.xmlrpc [3.1.3 3.1.3]
    org.apache.ws.commons.util [1.0.1 1.0.1]
    org.apache.commons.lang [2.6 2.6]
    com.jcraft.jzlib [1.1.3 1.1.3]
    com.googlecode.javaewah.JavaEWAH [1.1.6 1.1.6]
    bcprov [1.70 1.70]
    bcpg [1.70 1.70]
INFO [org.netbeans.core.netigso.Netigso]: bundle org.eclipse.osgi@3.9.1.v20140110-1610 started
INFO [org.netbeans.core.network.proxy.NetworkProxyReloader]: System network proxy resolver: Windows
INFO [org.netbeans.core.network.proxy.NetworkProxyReloader]: System network proxy reloading succeeded.
INFO [org.netbeans.core.network.proxy.NetworkProxyReloader]: System network proxy - mode: direct
INFO [org.netbeans.core.network.proxy.NetworkProxyReloader]: System network proxy: fell to default (correct if direct mode went before)
INFO [org.netbeans.ui.metrics.laf]: USG_LOOK_AND_FEEL
WARNING [org.netbeans.TopSecurityManager]: use of system property netbeans.home has been obsoleted in favor of InstalledFileLocator/Places at org.netbeans.modules.java.j2seplatform.platformdefinition.Util.removeNBArtifacts(Util.java:341)
INFO [org.netbeans.ui.metrics.vcs]: USG_VCS_CLIENT
Diagnostic information
Input arguments:
    -Dnetbeans.importclass=org.netbeans.upgrade.AutoUpgrade
    -XX:+UseStringDeduplication
    -Xss2m
    -Dapple.laf.useScreenMenuBar=true
    -Dapple.awt.application.appearance=system
    -Dapple.awt.graphics.UseQuartz=true
    -Dsun.java2d.noddraw=true
    -Dsun.java2d.dpiaware=true
    -Dsun.zip.disableMemoryMapping=true
    -Dplugin.manager.check.updates=false
    -Dnetbeans.extbrowser.manual_chrome_plugin_install=yes
    --add-opens=java.base/java.net=ALL-UNNAMED
    --add-opens=java.base/java.lang.ref=ALL-UNNAMED
    --add-opens=java.base/java.lang=ALL-UNNAMED
    --add-opens=java.base/java.security=ALL-UNNAMED
    --add-opens=java.base/java.util=ALL-UNNAMED
    --add-opens=java.base/java.nio=ALL-UNNAMED
    --add-exports=java.base/sun.reflect.annotation=ALL-UNNAMED
    --add-opens=java.prefs/java.util.prefs=ALL-UNNAMED
    --add-opens=java.desktop/javax.swing.plaf.basic=ALL-UNNAMED
    --add-opens=java.desktop/javax.swing.text=ALL-UNNAMED
    --add-opens=java.desktop/javax.swing=ALL-UNNAMED
    --add-opens=java.desktop/java.awt=ALL-UNNAMED
    --add-opens=java.desktop/java.awt.event=ALL-UNNAMED
    --add-opens=java.desktop/sun.awt.X11=ALL-UNNAMED
    --add-opens=java.desktop/javax.swing.plaf.synth=ALL-UNNAMED
    --add-opens=java.desktop/com.sun.java.swing.plaf.gtk=ALL-UNNAMED
    --add-opens=java.desktop/sun.awt.shell=ALL-UNNAMED
    --add-opens=java.desktop/sun.awt.im=ALL-UNNAMED
    --add-exports=java.desktop/sun.awt=ALL-UNNAMED
    --add-exports=java.desktop/java.awt.peer=ALL-UNNAMED
    --add-exports=java.desktop/com.sun.beans.editors=ALL-UNNAMED
    --add-exports=java.desktop/sun.swing=ALL-UNNAMED
    --add-exports=java.desktop/sun.awt.im=ALL-UNNAMED
    --add-exports=java.desktop/com.sun.java.swing.plaf.motif=ALL-UNNAMED
    --add-exports=java.desktop/com.apple.eio=ALL-UNNAMED
    --add-opens=jdk.compiler/com.sun.tools.javac.api=ALL-UNNAMED
    --add-opens=jdk.compiler/com.sun.tools.javac.code=ALL-UNNAMED
    --add-opens=jdk.compiler/com.sun.tools.javac.comp=ALL-UNNAMED
    --add-opens=jdk.compiler/com.sun.tools.javac.file=ALL-UNNAMED
    --add-opens=jdk.compiler/com.sun.tools.javac.jvm=ALL-UNNAMED
    --add-opens=jdk.compiler/com.sun.tools.javac.main=ALL-UNNAMED
    --add-opens=jdk.compiler/com.sun.tools.javac.model=ALL-UNNAMED
    --add-opens=jdk.compiler/com.sun.tools.javac.parser=ALL-UNNAMED
    --add-opens=jdk.compiler/com.sun.tools.javac.processing=ALL-UNNAMED
    --add-opens=jdk.compiler/com.sun.tools.javac.tree=ALL-UNNAMED
    --add-opens=jdk.compiler/com.sun.tools.javac.util=ALL-UNNAMED
    --add-exports=jdk.compiler/com.sun.tools.javac.api=ALL-UNNAMED
    --add-exports=jdk.compiler/com.sun.tools.javac.code=ALL-UNNAMED
    --add-exports=jdk.compiler/com.sun.tools.javac.comp=ALL-UNNAMED
    --add-exports=jdk.compiler/com.sun.tools.javac.file=ALL-UNNAMED
    --add-exports=jdk.compiler/com.sun.tools.javac.jvm=ALL-UNNAMED
    --add-exports=jdk.compiler/com.sun.tools.javac.main=ALL-UNNAMED
    --add-exports=jdk.compiler/com.sun.tools.javac.model=ALL-UNNAMED
    --add-exports=jdk.compiler/com.sun.tools.javac.parser=ALL-UNNAMED
    --add-exports=jdk.compiler/com.sun.tools.javac.processing=ALL-UNNAMED
    --add-exports=jdk.compiler/com.sun.tools.javac.tree=ALL-UNNAMED
    --add-exports=jdk.compiler/com.sun.tools.javac.util=ALL-UNNAMED
    --add-modules=jdk.jshell
    --add-opens=jdk.jshell/jdk.jshell=ALL-UNNAMED
    --add-exports=jdk.jdeps/com.sun.tools.classfile=ALL-UNNAMED
    --add-exports=jdk.jdeps/com.sun.tools.javap=ALL-UNNAMED
    --add-exports=jdk.internal.jvmstat/sun.jvmstat.monitor=ALL-UNNAMED
    --add-exports=java.management/sun.management=ALL-UNNAMED
    -XX:+IgnoreUnrecognizedVMOptions
    -Djdk.home=C:\Program Files\Java\jdk-17
    -Dnetbeans.home=C:\Program Files\NetBeans-18\netbeans\platform
    -Dnetbeans.user=C:\Users\rlc\AppData\Roaming\NetBeans\18
    -Dnetbeans.default_userdir_root=C:\Users\rlc\AppData\Roaming\NetBeans
    -XX:+HeapDumpOnOutOfMemoryError
    -XX:HeapDumpPath=C:\Users\rlc\AppData\Roaming\NetBeans\18\var\log\heapdump.hprof
    -Dsun.awt.keepWorkingSetOnMinimize=true
    -Djava.security.manager=allow
    -Dnetbeans.dirs=C:\Program Files\NetBeans-18\netbeans\nb;C:\Program Files\NetBeans-18\netbeans\ergonomics;C:\Program Files\NetBeans-18\netbeans\ide;C:\Program Files\NetBeans-18\netbeans\extide;C:\Program Files\NetBeans-18\netbeans\java;C:\Program Files\NetBeans-18\netbeans\apisupport;C:\Program Files\NetBeans-18\netbeans\webcommon;C:\Program Files\NetBeans-18\netbeans\websvccommon;C:\Program Files\NetBeans-18\netbeans\enterprise;C:\Program Files\NetBeans-18\netbeans\mobility;C:\Program Files\NetBeans-18\netbeans\profiler;C:\Program Files\NetBeans-18\netbeans\python;C:\Program Files\NetBeans-18\netbeans\php;C:\Program Files\NetBeans-18\netbeans\identity;C:\Program Files\NetBeans-18\netbeans\harness;C:\Program Files\NetBeans-18\netbeans\cnd;C:\Program Files\NetBeans-18\netbeans\cndext;C:\Program Files\NetBeans-18\netbeans\cpplite;C:\Program Files\NetBeans-18\netbeans\dlight;C:\Program Files\NetBeans-18\netbeans\groovy;C:\Program Files\NetBeans-18\netbeans\extra;C:\Program Files\NetBeans-18\netbeans\javacard;C:\Program Files\NetBeans-18\netbeans\javafx;C:\Program Files\NetBeans-18\netbeans\rust
Compiler: HotSpot 64-Bit Tiered Compilers
Heap memory usage: initial 256.0MB maximum 4072.0MB
Non heap memory usage: initial 7.3MB maximum -1b
Garbage collector: G1 Young Generation (Collections=15 Total time spent=0s)
Garbage collector: G1 Old Generation (Collections=0 Total time spent=0s)
Classes: loaded=12278 total loaded=12278 unloaded 0
INFO [org.netbeans.core.ui.warmup.DiagnosticTask]: Total memory 17,071,357,952
INFO [null]: Total physical memory 17,071,357,952
INFO [org.netbeans.ui.metrics.php]: Existing PHP project opened [frameworks: Smarty PHP Web Framework].
INFO [org.netbeans.modules.php.editor.parser.GSFPHPParser]: Parsing of big PHP files enabled: false (max size: 5,000,000)
INFO [org.netbeans.ui.metrics.php]: Existing PHP project opened [frameworks: ].
INFO [null]: Last record repeated 4 more times.
INFO [org.netbeans.modules.subversion]: Finished indexing svn cache with 0 entries. Elapsed time: 0 ms.
INFO [org.netbeans.ui.metrics.php]: Existing PHP project opened [frameworks: ].
INFO [null]: Last record repeated 5 more times.
INFO [null]: Last record repeated again.
INFO [org.netbeans.ui.metrics.projects]: USG_PROJECT_OPEN
INFO [null]: Last record repeated 13 times in total.
INFO [org.netbeans.ui.indexing]: Indexing started, time from last indexing 0 ms.
INFO [org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater]: Resolving dependencies took: 45 ms
INFO [org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater]: Complete indexing of 0 binary roots took: 1 ms
INFO [org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater]: Indexing of: jar:file:/C:/Program%20Files/NetBeans-18/netbeans/php/docs/phpsigfiles.zip!/phpstubs/phpruntime/ took: 489 ms (New or modified files: 0, Deleted files: 0) [Adding listeners took: 0 ms]
INFO [org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater]: Indexing of: nbfs://nbhost/SystemFileSystem/PHP/RuntimeLibraries/ took: 57 ms (New or modified files: 0, Deleted files: 0) [Adding listeners took: 0 ms]
INFO [org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater]: Indexing of: D:\home\www\directory took: 720 ms (New or modified files: 0, Deleted files: 0) [Adding listeners took: 2 ms]
INFO [org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater]: Indexing of: D:\home\www\iss took: 10,411 ms (New or modified files: 12, Deleted files: 0) [Adding listeners took: 0 ms]
INFO [org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater]: Indexing of: D:\home\www\inventory took: 265 ms (New or modified files: 0, Deleted files: 0) [Adding listeners took: 0 ms]
INFO [org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater]: Indexing of: C:\Program Files\NetBeans-18\netbeans\webcommon\jsstubs\core-stubs.zip took: 104 ms (New or modified files: 0, Deleted files: 0) [Adding listeners took: 0 ms]
INFO [org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater]: Indexing of: D:\home\www\quality took: 2,376 ms (New or modified files: 11, Deleted files: 0) [Adding listeners took: 0 ms]
INFO [org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater]: Indexing of: D:\home\www\testmenu took: 116 ms (New or modified files: 0, Deleted files: 0) [Adding listeners took: 0 ms]
INFO [org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater]: Indexing of: D:\home\www\vpn took: 118 ms (New or modified files: 0, Deleted files: 0) [Adding listeners took: 0 ms]
INFO [org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater]: Indexing of: D:\home\rlc took: 4,581 ms (New or modified files: 0, Deleted files: 0) [Adding listeners took: 0 ms]
INFO [org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater]: Indexing of: D:\home\www\invoice took: 156 ms (New or modified files: 0, Deleted files: 0) [Adding listeners took: 0 ms]
INFO [org.netbeans.core.ui.focus]: External Changes Refresh on focus gain disabled
INFO [org.netbeans.modules.subversion]: Subversion.cleanupTask: Scanning in progress, trying again in 10,000ms
INFO [org.netbeans.modules.git.status]: GitInterceptor.refreshTask: Scanning in progress, trying again in 10,000ms
INFO [org.netbeans.modules.subversion]: Subversion.cleanupTask: Scanning in progress, trying again in 10,000ms
INFO [org.netbeans.modules.git.status]: GitInterceptor.refreshTask: Scanning in progress, trying again in 10,000ms
INFO [org.netbeans.modules.subversion]: Subversion.cleanupTask: Scanning in progress, trying again in 10,000ms
INFO [org.netbeans.modules.git.status]: GitInterceptor.refreshTask: Scanning in progress, trying again in 10,000ms
INFO [org.netbeans.modules.subversion]: Subversion.cleanupTask: Scanning in progress, trying again in 10,000ms
INFO [org.netbeans.modules.git.status]: GitInterceptor.refreshTask: Scanning in progress, trying again in 10,000ms
INFO [org.netbeans.modules.subversion]: Subversion.cleanupTask: Scanning in progress, trying again in 10,000ms
INFO [org.netbeans.modules.git.status]: GitInterceptor.refreshTask: Scanning in progress, trying again in 10,000ms
INFO [org.netbeans.modules.subversion]: Subversion.cleanupTask: Scanning in progress, trying again in 10,000ms
INFO [org.netbeans.modules.git.status]: GitInterceptor.refreshTask: Scanning in progress, trying again in 10,000ms
INFO [org.netbeans.modules.subversion]: Subversion.cleanupTask: Scanning in progress, trying again in 10,000ms
INFO [org.netbeans.modules.git.status]: GitInterceptor.refreshTask: Scanning in progress, trying again in 10,000ms
INFO [org.netbeans.modules.subversion]: Subversion.cleanupTask: Scanning in progress, trying again in 10,000ms
INFO [org.netbeans.modules.git.status]: GitInterceptor.refreshTask: Scanning in progress, trying again in 10,000ms
INFO [org.netbeans.modules.subversion]: Subversion.cleanupTask: Scanning in progress, trying again in 10,000ms
INFO [org.netbeans.modules.git.status]: GitInterceptor.refreshTask: Scanning in progress, trying again in 10,000ms
WARNING [org.netbeans.modules.git.status]: inconsistent status found for D:\home\www\oenq\oenq\scripts\oenq_update_summary_pricing.php: [MODIFIED_HEAD_WORKING_TREE, MODIFIED_INDEX_WORKING_TREE]
WARNING [org.netbeans.modules.git.status]: inconsistent status found for D:\home\www\iss\advantage\nbproject\project.properties: [MODIFIED_HEAD_WORKING_TREE, MODIFIED_INDEX_WORKING_TREE]
WARNING [org.netbeans.modules.git.status]: inconsistent status found for D:\home\www\iss\advantage\nbproject\project.xml: [MODIFIED_HEAD_WORKING_TREE, MODIFIED_INDEX_WORKING_TREE]
WARNING [org.netbeans.modules.git.status]: inconsistent status found for D:\home\www\iss\custom\.htaccess: [MODIFIED_HEAD_WORKING_TREE, MODIFIED_INDEX_WORKING_TREE]
WARNING [org.netbeans.modules.git.status]: inconsistent status found for D:\home\www\iss\reports\phpexcel\PHPExcel\Shared\PCLZip\gnu-lgpl.txt: [MODIFIED_HEAD_WORKING_TREE, MODIFIED_INDEX_WORKING_TREE]
WARNING [org.netbeans.modules.git.status]: inconsistent status found for D:\home\www\iss\reports\phpexcel\PHPExcel\Shared\PCLZip\readme.txt: [MODIFIED_HEAD_WORKING_TREE, MODIFIED_INDEX_WORKING_TREE]
WARNING [org.netbeans.modules.git.status]: inconsistent status found for D:\home\www\iss\reports\phpexcel\PHPExcel\locale\pt\br\functions: [MODIFIED_HEAD_WORKING_TREE, MODIFIED_INDEX_WORKING_TREE]
WARNING [org.netbeans.modules.git.status]: inconsistent status found for D:\home\www\iss\reports\phpexcel\PHPExcel\locale\pt\functions: [MODIFIED_HEAD_WORKING_TREE, MODIFIED_INDEX_WORKING_TREE]
WARNING [org.netbeans.modules.git.status]: inconsistent status found for D:\home\www\iss\reports\phpexcel\PHPExcel\locale\sv\functions: [MODIFIED_HEAD_WORKING_TREE, MODIFIED_INDEX_WORKING_TREE]
INFO [org.netbeans.modules.parsing.api.Source]
java.lang.OutOfMemoryError: Java heap space
    at java.base/java.lang.StringUTF16.newBytesFor(StringUTF16.java:53)
    at java.base/java.lang.AbstractStringBuilder.inflate(AbstractStringBuilder.java:272)
    at java.base/java.lang.AbstractStringBuilder.append(AbstractStringBuilder.java:807)
    at java.base/java.lang.StringBuilder.append(StringBuilder.java:246)
    at org.netbeans.modules.parsing.api.Source.createSnapshot(Source.java:378)
    at org.netbeans.modules.parsing.impl.SourceCache.createSnapshot(SourceCache.java:157)
    at org.netbeans.modules.parsing.impl.SourceCache.getSnapshot(SourceCache.java:132)
    at org.netbeans.modules.parsing.api.ParserManager$LazySnapshots$LazySnapshotsIt.next(ParserManager.java:294)
    at org.netbeans.modules.parsing.api.ParserManager$LazySnapshots$LazySnapshotsIt.next(ParserManager.java:279)
    at org.netbeans.modules.csl.core.GsfParserFactory.createParser(GsfParserFactory.java:42)
    at org.netbeans.modules.parsing.api.ParserManager$MultiUserTaskAction.run(ParserManager.java:162)
    at org.netbeans.modules.parsing.api.ParserManager$MultiUserTaskAction.run(ParserManager.java:140)
    at org.netbeans.modules.parsing.impl.TaskProcessor$2.call(TaskProcessor.java:181)
    at org.netbeans.modules.parsing.impl.TaskProcessor$2.call(TaskProcessor.java:178)
    at org.netbeans.modules.masterfs.filebasedfs.utils.FileChangedManager.priorityIO(FileChangedManager.java:153)
    at org.netbeans.modules.masterfs.providers.ProvidedExtensions.priorityIO(ProvidedExtensions.java:335)
    at org.netbeans.modules.parsing.nb.DataObjectEnvFactory.runPriorityIO(DataObjectEnvFactory.java:118)
    at org.netbeans.modules.parsing.impl.Utilities.runPriorityIO(Utilities.java:67)
    at org.netbeans.modules.parsing.impl.TaskProcessor.runUserTask(TaskProcessor.java:178)
    at org.netbeans.modules.parsing.api.ParserManager.parse(ParserManager.java:85)
    at org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater$Work.indexEmbedding(RepositoryUpdater.java:3268)
    at org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater$Work.doIndex(RepositoryUpdater.java:2861)
    at org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater$Work.lambda$index$0(RepositoryUpdater.java:2626)
    at org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater$Work$$Lambda$521/0x0000021c27b433f0.run(Unknown Source)
    at org.netbeans.modules.parsing.impl.indexing.errors.TaskCache.refreshTransaction(TaskCache.java:540)
    at org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater$Work.index(RepositoryUpdater.java:2625)
    at org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater$AbstractRootsWork.lambda$scanSource$3(RepositoryUpdater.java:5735)
    at org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater$AbstractRootsWork$$Lambda$507/0x0000021c27b0c228.call(Unknown Source)
    at org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater.lambda$runInContext$4(RepositoryUpdater.java:2119)
    at org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater$$Lambda$508/0x0000021c27b0c868.run(Unknown Source)
    at org.openide.util.lookup.Lookups.executeWith(Lookups.java:288)
[catch] at org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater.runInContext(RepositoryUpdater.java:2117)
WARNING [org.netbeans.modules.parsing.api.Source]: Can't create snapshot of D:\home\www\sales\.phpdoc\build\classes\phpDocumentor-Reflection-DocBlock-Tag-VersionTagTest.html@2e055dd6:246989de, size=1120087, mimeType=text/html
INFO [org.netbeans.modules.parsing.api.Source]
java.lang.OutOfMemoryError: Java heap space
    at java.base/java.lang.StringUTF16.newBytesFor(StringUTF16.java:53)
    at java.base/java.lang.AbstractStringBuilder.inflate(AbstractStringBuilder.java:272)
    at java.base/java.lang.AbstractStringBuilder.append(AbstractStringBuilder.java:807)
    at java.base/java.lang.StringBuilder.append(StringBuilder.java:246)
    at org.netbeans.modules.parsing.api.Source.createSnapshot(Source.java:378)
    at org.netbeans.modules.parsing.impl.SourceCache.createSnapshot(SourceCache.java:157)
    at org.netbeans.modules.parsing.impl.SourceCache.getSnapshot(SourceCache.java:132)
    at org.netbeans.modules.parsing.api.ParserManager$LazySnapshots$LazySnapshotsIt.next(ParserManager.java:294)
    at org.netbeans.modules.parsing.api.ParserManager$LazySnapshots$LazySnapshotsIt.next(ParserManager.java:279)
    at org.netbeans.modules.csl.core.GsfParserFactory.createParser(GsfParserFactory.java:42)
    at org.netbeans.modules.parsing.api.ParserManager$MultiUserTaskAction.run(ParserManager.java:162)
    at org.netbeans.modules.parsing.api.ParserManager$MultiUserTaskAction.run(ParserManager.java:140)
    at org.netbeans.modules.parsing.impl.TaskProcessor$2.call(TaskProcessor.java:181)
    at org.netbeans.modules.parsing.impl.TaskProcessor$2.call(TaskProcessor.java:178)
    at org.netbeans.modules.masterfs.filebasedfs.utils.FileChangedManager.priorityIO(FileChangedManager.java:153)
    at org.netbeans.modules.masterfs.providers.ProvidedExtensions.priorityIO(ProvidedExtensions.java:335)
    at org.netbeans.modules.parsing.nb.DataObjectEnvFactory.runPriorityIO(DataObjectEnvFactory.java:118)
    at org.netbeans.modules.parsing.impl.Utilities.runPriorityIO(Utilities.java:67)
    at org.netbeans.modules.parsing.impl.TaskProcessor.runUserTask(TaskProcessor.java:178)
    at org.netbeans.modules.parsing.api.ParserManager.parse(ParserManager.java:85)
    at org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater$Work.indexEmbedding(RepositoryUpdater.java:3268)
    at org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater$Work.doIndex(RepositoryUpdater.java:2861)
    at org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater$Work.lambda$index$0(RepositoryUpdater.java:2626)
    at org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater$Work$$Lambda$521/0x0000021c27b433f0.run(Unknown Source)
    at org.netbeans.modules.parsing.impl.indexing.errors.TaskCache.refreshTransaction(TaskCache.java:540)
    at org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater$Work.index(RepositoryUpdater.java:2625)
    at org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater$AbstractRootsWork.lambda$scanSource$3(RepositoryUpdater.java:5735)
    at org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater$AbstractRootsWork$$Lambda$507/0x0000021c27b0c228.call(Unknown Source)
    at org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater.lambda$runInContext$4(RepositoryUpdater.java:2119)
    at org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater$$Lambda$508/0x0000021c27b0c868.run(Unknown Source)
    at org.openide.util.lookup.Lookups.executeWith(Lookups.java:288)
[catch] at org.netbeans.modules.parsing.impl.indexing.RepositoryUpdater.runInContext(RepositoryUpdater.java:2117)
WARNING [org.netbeans.modules.parsing.api.Source]: Can't create snapshot of D:\home\www\sales\.phpdoc\build\classes\Sabre-VObject-Recur-RRuleIteratorTest.html@35494696:8ee43f0, size=1184662, mimeType=text/html
INFO [org.netbeans.modules.parsing.api.Source]
java.lang.OutOfMemoryError: Java heap space
WARNING [org.netbeans.modules.parsing.api.Source]: Can't create snapshot of D:\home\www\sales\.phpdoc\build\classes\Sabre-VObject-Recur-EventIterator-InfiniteLoopProblemTest.html@7a678990:1ab2a580, size=1116881, mimeType=text/html
INFO [org.netbeans.modules.parsing.api.Source]
java.lang.OutOfMemoryError: Java heap space
WARNING [org.netbeans.modules.parsing.api.Source]: Can't create snapshot of D:\home\www\sales\.phpdoc\build\classes\Sabre-VObject-Recur-BySetPosHangTest.html@5a4eee41:55855301, size=1111522, mimeType=text/html
lkishalmi commented 1 year ago

You may open the heapdump in NetBeans and give a screenshot on that one.

deterset commented 1 year ago

ok here it is. In the mean time I made a copy of my project then deleted the ".phpdoc" folder and the "doc" folder which was a copy of the .phpdoc/build folder. Netbeans 18 is now loading fine. Maybe something in there was causing a memory runaway.

The .phpdoc folder was 2.7Gb The doc folder was 1.8 Gb

hprof-18-error

mbien commented 1 year ago

ok here it is. In the mean time I made a copy of my project then deleted the ".phpdoc" folder and the "doc" folder which was a copy of the .phpdoc/build folder. Netbeans 18 is now loading fine. Maybe something in there was causing a memory runaway.

anything unusual about those folders? e.g huge generated files or something like that?

I was about to suggest to bump the memory limit of your NetBeans instance a bit by adding -J-Xmx8G to your etc/netbeans.conf (as an experiment) but you already got rid of the folders. To be clear your instance sets the limit to 4GB which should be sufficient for most use cases. If this is an actual bug this would also occur with a 8GB limit, just a bit later.

Going to remove the git label since I can't find anything about git in the traces.

Should we close this issue?

junichi11 commented 1 year ago

Maybe, not PHP but HTML files have problems?

WARNING [org.netbeans.modules.parsing.api.Source]: Can't create snapshot of D:\home\www\sales\.phpdoc\build\classes\phpDocumentor-Reflection-DocBlock-Tag-VersionTagTest.html@2e055dd6:246989de, size=1120087, mimeType=text/html
deterset commented 1 year ago

ok here it is. In the mean time I made a copy of my project then deleted the ".phpdoc" folder and the "doc" folder which was a copy of the .phpdoc/build folder. Netbeans 18 is now loading fine. Maybe something in there was causing a memory runaway.

anything unusual about those folders? e.g huge generated files or something like that?

I was about to suggest to bump the memory limit of your NetBeans instance a bit by adding -J-Xmx8G to your etc/netbeans.conf (as an experiment) but you already got rid of the folders. To be clear your instance sets the limit to 4GB which should be sufficient for most use cases. If this is an actual bug this would also occur with a 8GB limit, just a bit later.

Going to remove the git label since I can't find anything about git in the traces.

Should we close this issue?

I still have those files so I can put them back and then bump up the memory and I will let you know what happens.

deterset commented 1 year ago

Okay, I have now tried 8G memory setting and I still get Unexpected Exception. It does take a little longer as you suggested. The memory graph at the top is frozen at 8107/8192MB. The .phpdoc directory is 2.8GB in size with 51,525 Files, 2967 Folders.

If I remove only the .phpdoc directory then Netbeans will load without any errors.

I may try to rerun the phpDocumentor program and see if this will fix any issues.

deterset commented 1 year ago

So, After deleting the old .phpdoc and cleaning out some old packages. I ran the phpDocumentor on the project again which took 39 minuets and 40 seconds. Then I closed Netbeans and Reopened Netbeans with out any errors. I even reduced the memory back to the default and all is working fine now. I think this issue can be closed.

mbien commented 1 year ago

@deterset excellent! Glad to hear that things are working.