[SEDONA-664] Add native GeoPackage reader

[Imbruced]

Did you read the Contributor Guide?

• Yes, I have read the Contributor Rules and Contributor Development Guide

Is this PR related to a JIRA ticket?

• No

What changes were proposed in this PR?

Geopackage datasource

How was this patch tested?

integration tests

Did this PR include necessary documentation updates?

• I ll adjust the docs

[Imbruced]

As a follow up to this mr, I need to add

• ewkb parsing (I think reading from circular geometries wont work)
• support for parallel loading via limit and offset
• add kindoff filtering based on envelope offset
• direct transformation from geopackage serialization to sedona

[Kontinuation]

Thank you for this great work! My major concern is whether it works with GeoPackage files stored on cloud storage such as HDFS or S3. As far as I know org.xerial:sqlite-jdbc only works with local files, so we may have to download the GeoPackage file from cloud storage to the local file system before reading it.

[Imbruced]

@Kontinuation good point, I ll write the test to make sure it works. Integration test with minio would be enough I think.

[Imbruced]

WIP

[Imbruced]

@Kontinuation thanks for the review !

[atiannicelli]

@jiayuasu I can't wait to be able to use this for Overture Buildings Conflation. We are looking at using a couple datasets that are packaged as gpkg files.

[Imbruced]

@jiayuasu remove show method calls

[Imbruced]

@jiayuasu I applied changes, and what I saw is that we are running previous pipelines even if new are starting I think it's worth adding concurrency mechanism in github actions https://docs.github.com/en/actions/writing-workflows/workflow-syntax-for-github-actions#concurrency