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apcamargo / genomad

geNomad: Identification of mobile genetic elements
https://portal.nersc.gov/genomad/
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virus taxonomy only #82

Closed Caiyulu-818 closed 3 months ago

Caiyulu-818 commented 3 months ago

Is it ok to run genomad directly annotate virus sequence for taxonmy?

How can I use genomad command to annotate virus sequences?

apcamargo commented 3 months ago

Yes! If you are only interested in taxonomy, you may only execute the annotate module. Just run genomad annotate -h to check the instructions.