Closed romainfrancois closed 2 years ago
It also seems to affect photobiologyInOut
:
# photobiologyInOut
<details>
* Version: 0.4.23
* GitHub: https://github.com/aphalo/photobiologyinout
* Source code: https://github.com/cran/photobiologyInOut
* Date/Publication: 2021-10-11 04:10:01 UTC
* Number of recursive dependencies: 117
Run `cloud_details(, "photobiologyInOut")` for more info
</details>
## Newly broken
* checking examples ... ERROR
Running examples in ‘photobiologyInOut-Ex.R’ failed
The error most likely occurred in:
> ### Name: colorSpec2mspct
> ### Title: Convert 'colorSpec::colorSpec' objects
> ### Aliases: colorSpec2mspct as.source_spct.colorSpec
> ### as.source_mspct.colorSpec as.response_spct.colorSpec
> ### as.response_mspct.colorSpec as.filter_spct.colorSpec
> ### as.filter_mspct.colorSpec as.reflector_spct.colorSpec
> ### as.reflector_mspct.colorSpec as.chroma_mspct.colorSpec colorSpec2spct
...
The following object is masked from ‘package:photobiology’:
normalize
Object: source_spct [93 x 2]
Wavelength range 320 to 780 nm, step 5 nm
Time unit 1s
Error: 'trunc_mat' is not an exported object from 'namespace:dplyr'
Execution halted
```
checking re-building of vignette outputs ... WARNING
Error(s) in re-building vignettes:
--- re-building ‘user-guide.Rmd’ using rmarkdown
News at https://www.r4photobiology.info/
Attaching package: 'lubridate'
The following objects are masked from 'package:base':
date, intersect, setdiff, union
...
Quitting from lines 525-530 (user-guide.Rmd)
Error: processing vignette 'user-guide.Rmd' failed with diagnostics:
'trunc_mat' is not an exported object from 'namespace:dplyr'
--- failed re-building ‘user-guide.Rmd’
SUMMARY: processing the following file failed:
‘user-guide.Rmd’
Error: Vignette re-building failed.
Execution halted
Namespace in Imports field not imported from: ‘lazyeval’
All declared Imports should be used.
@romainfrancois It was easy enough in this case to remove the only call to trunc_mat()
in package 'photobiology'. I have pushed the fix to GitHub. (The error in 'photobiologyInOut' was in a call to the same function from 'photobiology'.) When do you plan to submit 'dplyr' 1.0.8 to CRAN? How much time do I have to address other issues before submitting 'photobiology' to CRAN?
Probably this week, or early next week.
o.k., I will leave other changes for the next release. Thanks!
'photobiology' 0.1.9' has passed CRAN checks and is now on its way to CRAN
We're about to release dplyr 1.0.8 and it seems that the released version of
photobiology
has issues:checking dependencies in R code ... WARNING
checking re-building of vignette outputs ... WARNING
it seems however fixed in the dev version.