Feature request: Patient trajectories vizualization - Githubissues

aphp / eds-scikit

eds-scikit is a Python library providing tools to process and analyse OMOP data

https://aphp.github.io/eds-scikit

BSD 3-Clause "New" or "Revised" License

35 stars 5 forks source link

Feature request: Patient trajectories vizualization #30

Open JCharline opened 1 year ago

JCharline commented 1 year ago

Feature type

Functionality to plot patient trajectory based on various events. More generaly, it can handle any sequence of events.

Description

For the moment, the entry data will look like:

Entry DF

Minimal

person
event
t_start
t_end

Additional

index_date
family

For the function paramters:

Can be launched with no additional parameters

Optional

event mapping (see below)
family to index mapping
columns name mapping
list of person ids to plot
figure parameters
same_x_axis_scale

event_mapping:

color =
type = point / continuous
label

figure parameters:

width / height
bar height, point width
title / labels parameters