aphp / eds-scikit

eds-scikit is a Python library providing tools to process and analyse OMOP data
https://aphp.github.io/eds-scikit
BSD 3-Clause "New" or "Revised" License
35 stars 5 forks source link

Tools compatibility #48

Closed Aremaki closed 11 months ago

Aremaki commented 1 year ago

Make the toole eds-scikit compatible with edsteva, edstoolbox and edsnlp

Description

Bump versions of altair and loguru

Checklist

codecov[bot] commented 1 year ago

Codecov Report

Patch coverage: 100.00% and project coverage change: -0.01% :warning:

Comparison is base (001fe9b) 83.84% compared to head (4694490) 83.83%. Report is 1 commits behind head on main.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #48 +/- ## ========================================== - Coverage 83.84% 83.83% -0.01% ========================================== Files 82 82 Lines 2494 2493 -1 ========================================== - Hits 2091 2090 -1 Misses 403 403 ``` | [Files Changed](https://app.codecov.io/gh/aphp/eds-scikit/pull/48?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=aphp) | Coverage Δ | | |---|---|---| | [eds\_scikit/io/hive.py](https://app.codecov.io/gh/aphp/eds-scikit/pull/48?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=aphp#diff-ZWRzX3NjaWtpdC9pby9oaXZlLnB5) | `100.00% <ø> (ø)` | | | [eds\_scikit/plot/age\_pyramid.py](https://app.codecov.io/gh/aphp/eds-scikit/pull/48?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=aphp#diff-ZWRzX3NjaWtpdC9wbG90L2FnZV9weXJhbWlkLnB5) | `100.00% <ø> (ø)` | | | [eds\_scikit/plot/event\_sequences.py](https://app.codecov.io/gh/aphp/eds-scikit/pull/48?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=aphp#diff-ZWRzX3NjaWtpdC9wbG90L2V2ZW50X3NlcXVlbmNlcy5weQ==) | `100.00% <ø> (ø)` | | | [eds\_scikit/biology/viz/plot.py](https://app.codecov.io/gh/aphp/eds-scikit/pull/48?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=aphp#diff-ZWRzX3NjaWtpdC9iaW9sb2d5L3Zpei9wbG90LnB5) | `93.28% <100.00%> (-0.05%)` | :arrow_down: | | [eds\_scikit/biology/viz/wrapper.py](https://app.codecov.io/gh/aphp/eds-scikit/pull/48?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=aphp#diff-ZWRzX3NjaWtpdC9iaW9sb2d5L3Zpei93cmFwcGVyLnB5) | `85.29% <100.00%> (ø)` | |

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Thomzoy commented 11 months ago

Ok for me ! Deleting the csv and html files in Biology summary has no impact (ie in the doc) ?

Aremaki commented 11 months ago

No, it is not use in the doc