apriha / snps

tools for reading, writing, merging, and remapping SNPs
BSD 3-Clause "New" or "Revised" License
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Fix 23andme missing chromosome and/or position #136

Closed afaulconbridge closed 3 years ago

afaulconbridge commented 3 years ago

In a few rare cases, we've seen 23andMe files with unusual chromosome and/or position values, which would cause the files to fail to parse correctly.

This change instead drops rows with missing values in those columns, and standardises chromosome names into the string representation (instead of a numeric form sometimes detected).