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apriha / snps

tools for reading, writing, merging, and remapping SNPs
BSD 3-Clause "New" or "Revised" License
98 stars 19 forks source link

Sano updates #137

Closed apriha closed 3 years ago

apriha commented 3 years ago

Commits from #133, with minor changes to test resources and fix merge conflict.

codecov[bot] commented 3 years ago

Codecov Report

Merging #137 (b5571f2) into develop (28de7e1) will increase coverage by 0.52%. The diff coverage is 84.10%.

Impacted file tree graph

@@             Coverage Diff             @@
##           develop     #137      +/-   ##
===========================================
+ Coverage    92.89%   93.42%   +0.52%     
===========================================
  Files            8        8              
  Lines         1478     1536      +58     
  Branches       255      272      +17     
===========================================
+ Hits          1373     1435      +62     
+ Misses          66       54      -12     
- Partials        39       47       +8
Impacted Files Coverage Δ
src/snps/snps.py 95.78% <71.42%> (+1.15%) :arrow_up:
src/snps/io/reader.py 94.32% <85.41%> (-3.14%) :arrow_down:
src/snps/resources.py 94.16% <92.59%> (-0.54%) :arrow_down:
src/snps/ensembl.py 70.73% <0.00%> (+39.02%) :arrow_up:

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