aqlaboratory / rgn2

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No ***.tertiary #10

Open Lsz-20 opened 1 year ago

Lsz-20 commented 1 year ago

Hello,i'm running the rgn2_predict.ipynb, and it show me that 'No such file or directory: runs/15106000/1/outputsTesting/test_26f842.tertiary', I see that 'TER_PATH = os.path.join(RUN_DIR, '1', 'outputsTesting', f'{seq_id}.tertiary')' and 'ter2pdb.run_ca_to_allatom(seq_path=SEQ_PATH, ter_path=TER_PATH,output_dir=OUTPUT_DIR, seq_id=seq_id)' here, which may cause the problem.It seems runs/15106000/1/outputsTesting has no tertiary? I also found that outputs: Sequences being removed due to length: 0 Sequences being removed: [] [] Featurizing input but my input is 150? What should I do with it?Thanks.