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aquaskyline / SOAPdenovo2

Next generation sequencing reads de novo assembler.
GNU General Public License v3.0
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incompatible libbam.a #61

Closed xqhuang1018 closed 4 years ago

xqhuang1018 commented 5 years ago

Hi, when "make" the SOAPdenovo2 on the Power8 (ppc64le), it is not able to generate the executables, because of the preexisted libbam.a can not be linked properly. Here is the error message: /usr/bin/ld: skipping incompatible ./sparsePregraph/inc/libbam.a when searching for -lbam /usr/bin/ld: skipping incompatible ./standardPregraph/inc/libbam.a when searching for -lbam /usr/bin/ld: cannot find -lbam collect2: error: ld returned 1 exit status make: *** [SOAPdenovo-63mer] Error 1

the libraries (libbam.a libbam_1.a ) are already included in the deposit. Please provide a way to figure this issue out.

ibio-project commented 5 years ago

The error message tells the library is incompatible. You should remove libbam.a and libbam_1.a so that `make' tool can rebuild them properly.