search

arborworkflows / aRbor

aRbor, an R package with useful functions for Arbor workflows
5 stars 3 forks source link

easy mode does not read header line #36

Open bobthacker opened 9 years ago

bobthacker commented 9 years ago

in both phylogenetic signal and ancestral state, the parser of the trait file does not read the header line. this happens in both .csv and .tsv formats instead, the columns are simply Column 1 and Column 2... and subsequent calculations will fail because the length of the traits is different from the length of the tip labels. workaround: i left off the headers, and just remembered what was in each column.

jeffbaumes commented 9 years ago

This will be fixed when arbor.kitware.com updates this week. Now we will always assume CSV/TSV data has headers so you will never get "Column 1", etc.