Link Checker Report

[github-actions[bot]]

Summary

Status	Count
🔍 Total	2084
✅ Successful	1915
⏳ Timeouts	1
🔀 Redirected	0
👻 Excluded	99
❓ Unknown	0
🚫 Errors	69

Errors per input

Errors in r_basics_visualize_data/r_basics_visualize_data.md

• [TIMEOUT] https://serialmentor.com/dataviz | Timeout

Errors in docker_101/docker_101.md

• [404] https://docker-handbook.farhan.dev/image-manipulation-basics#tagging-images | Failed: Network error: Not Found
• [404] https://tilburgsciencehub.com/building-blocks/automate-and-execute-your-work/reproducible-work/docker/ | Failed: Network error: Not Found

Errors in r_missing_values/r_missing_values.md

• [ERR] http://math.wsu.edu/faculty/xchen/stat115/lectureNotes3/Rubin%20Inference%20and%20Missing%20Data.pdf | Failed: Network error: error:0A000086:SSL routines:tls_post_process_server_certificate:certificate verify failed:ssl/statem/statem_clnt.c:1890: (unable to get local issuer certificate)

Errors in elements_of_maps/elements_of_maps.md

• [404] https://www.opendataphilly.org/dataset/zip-codes | Failed: Network error: Not Found
• [404] https://www.opendataphilly.org/dataset/vehicular-crash-data | Failed: Network error: Not Found

Errors in genomics_setup/genomics_setup.md

• [404] https://terra.bio/resources/new-to-cloud/ | Failed: Network error: Not Found
• [404] https://github.com/datacarpentry/genomics-workshop/blob/gh-pages/LICENSE.md | Failed: Network error: Not Found

Errors in _for_authors/write_a_module.md

• [ERR] file:///home/runner/work/education_modules/education_modules/_for_authors/_module_templates | Failed: Cannot find file
• [ERR] file:///home/runner/work/education_modules/education_modules/issues | Failed: Cannot find file
• [ERR] file:///home/runner/work/education_modules/education_modules/_for_authors/LICENSE | Failed: Cannot find file

Errors in bias_variance_tradeoff/bias_variance_tradeoff.md

• [404] https://www.statlearning.com/online-course | Failed: Network error: Not Found

Errors in citizen_science/citizen_science.md

• [404] http://cognitivehealth.tech/wp-content/uploads/2019/02/DodellFeder2019-SCZRes.pdf | Failed: Network error: Not Found

Errors in regular_expressions_lookaheads/regular_expressions_lookaheads.md

• [429] https://regex101.com/r/NvzPb0/1 | Failed: Network error: Too Many Requests
• [ERR] https://www.regex101.com/ | Cached: Error (cached)

Errors in reproducibility/reproducibility.md

• [404] https://www.youtube.com/watch?v=66oNv_DJuPc?cc_load_policy=1 | Failed: Network error: Not Found

Errors in using_redcap_api/using_redcap_api.md

• [404] https://swcarpentry.github.io/r-novice-inflammation/09-supp-intro-rstudio/index.html#:~:text=The%20console%20window%20(in%20RStudio,when%20you%20close%20the%20session.) | Failed: Network error: Not Found

Errors in data_visualization_in_open_source_software/data_visualization_in_open_source_software.md

• [404] https://www.youtube-nocookie.com/embed/4zV9XqK0foM?start=2940 | Failed: Network error: Not Found

Errors in docs.md

• [ERR] file:///home/runner/work/education_modules/education_modules/example.com | Failed: Cannot find file

Errors in _for_authors/inclusivity_guidelines.md

• [404] https://handbook.floeproject.org/approachesoverview | Failed: Network error: Not Found
• [ERR] file:///home/runner/work/education_modules/education_modules/_for_authors/www.example.com | Failed: Cannot find file

Errors in .github/ISSUE_TEMPLATE/qa-for-exercise-modules.md

• [ERR] file:///home/runner/work/education_modules/education_modules/.github/ISSUE_TEMPLATE/www.example.com | Failed: Cannot find file
• [ERR] file:///home/runner/work/education_modules/education_modules/.github/ISSUE_TEMPLATE/versioning_guidelines.md | Failed: Cannot find file

Errors in .github/ISSUE_TEMPLATE/qa-for-wrapper-modules.md

• [ERR] file:///home/runner/work/education_modules/education_modules/.github/ISSUE_TEMPLATE/www.example.com | Failed: Cannot find file
• [ERR] file:///home/runner/work/education_modules/education_modules/.github/ISSUE_TEMPLATE/versioning_guidelines.md | Failed: Cannot find file

Errors in r_basics_introduction/r_basics_introduction.md

• [404] https://cran.rstudio.com/bin/macosx/contrib/4.1/tidyverse_1.3.1.tgz | Failed: Network error: Not Found

Errors in _for_authors/module_development_plans.md

• [404] https://github.com/orgs/arcus/projects/25 | Failed: Network error: Not Found

Errors in generalized_linear_regression/generalized_linear_regression.md

• [404] https://www.cdc.gov/violenceprevention/aces/fastfact.html | Failed: Network error: Not Found

Errors in git_creation_and_tracking/git_creation_and_tracking.md

• [ERR] file:///home/runner/work/education_modules/education_modules/git_creation_and_tracking/github.com | Failed: Cannot find file
• [404] https://swcarpentry.github.io/git-novice/06-ignore/index.html | Failed: Network error: Not Found
• [404] https://swcarpentry.github.io/shell-novice/03-create/#create-a-text-file | Failed: Network error: Not Found

Errors in regular_expressions_groups/regular_expressions_groups.md

• [ERR] https://www.regex101.com/ | Cached: Error (cached)
• [429] https://regex101.com/r/ZHs5iI/1 | Failed: Network error: Too Many Requests
• [429] https://regex101.com/r/XmG4kp/1 | Failed: Network error: Too Many Requests
• [429] https://regex101.com/r/ko7ySn/1 | Failed: Network error: Too Many Requests

Errors in data_visualization_in_seaborn/data_visualization_in_seaborn.md

• [404] https://hastie.su.domains/ISLR2/ISLRv2_website.pdf | Failed: Network error: Not Found

Errors in docs/index.md

• [ERR] file:///home/runner/work/education_modules/education_modules/docs/LICENSE | Failed: Cannot find file

Errors in demystifying_machine_learning/demystifying_machine_learning.md

• [500] https://dionysus.psych.wisc.edu/iaml/ | Failed: Network error: Internal Server Error
• [404] https://hastie.su.domains/ISLR2/ISLRv2_website.pdf | Failed: Network error: Not Found
• [404] https://www.statlearning.com/online-course | Cached: Error (cached)

Errors in python_practice/python_practice.md

• [404] http://datacamp-community-prod.s3.amazonaws.com/263130e2-2c92-4348-a356-9ed9b5034247 | Failed: Network error: Not Found

Errors in data_visualization_in_ggplot2/data_visualization_in_ggplot2.md

• [404] https://ggplot2-book.org/scale-colour.html | Failed: Network error: Not Found
• [404] https://ggplot2-book.org/polishing.html#modifying-theme-components | Failed: Network error: Not Found

Errors in regular_expressions_basics/regular_expressions_basics.md

• [ERR] https://www.regex101.com/ | Cached: Error (cached)
• [429] https://regex101.com/r/aODZog | Failed: Network error: Too Many Requests
• [429] https://regex101.com/r/9B6mzl | Failed: Network error: Too Many Requests

Errors in intro_to_nhst/intro_to_nhst.md

• [429] https://replicationindex.com/2015/01/24/qrps/ | Failed: Network error: Too Many Requests

Errors in .github/ISSUE_TEMPLATE/qa-for-standard-modules.md

• [ERR] file:///home/runner/work/education_modules/education_modules/.github/ISSUE_TEMPLATE/versioning_guidelines.md | Failed: Cannot find file
• [ERR] file:///home/runner/work/education_modules/education_modules/.github/ISSUE_TEMPLATE/www.example.com | Failed: Cannot find file

Errors in demystifying_geospatial_data/demystifying_geospatial_data.md

• [404] https://www.opendataphilly.org/dataset/vehicle-pedestrian-investigations | Failed: Network error: Not Found
• [ERR] https://link.springer.com/content/pdf/10.1007/s11524-022-00633-7.pdf | Failed: Too many redirects: error following redirect for url (https://link.springer.com/article/10.1007/s11524-022-00633-7): too many redirects

Errors in _module_templates/macros_genomics.md

• [404] https://datacarpentry.org/genomics-workshop/AMI-setup/#very-important-warning---avoid-unwanted-charges | Failed: Network error: Not Found
• [404] https://datacarpentry.org/genomics-workshop/setup.html | Failed: Network error: Not Found
• [404] https://datacarpentry.org/genomics-workshop/AMI-setup/#connect-to-your-amazon-instance-macoslinux | Failed: Network error: Not Found
• [404] https://datacarpentry.org/genomics-workshop/AMI-setup/#connect-to-your-amazon-instance-windows | Failed: Network error: Not Found

Errors in genomics_quality_control/genomics_quality_control.md

• [404] https://datacarpentry.org/genomics-workshop/AMI-setup/#connect-to-your-amazon-instance-macoslinux | Cached: Error (cached)
• [404] https://datacarpentry.org/shell-genomics/04-redirection/index.html#searching-files | Failed: Network error: Not Found

Errors in regular_expressions_boundaries_anchors/regular_expressions_boundaries_anchors.md

• [ERR] https://www.regex101.com/ | Cached: Error (cached)
• [429] https://regex101.com/r/4cZn0e/1 | Failed: Network error: Too Many Requests

Errors in quality_assurance_guide.md

• [404] https://github.com/arcus/education_modules/blob/name_of_branch/name_of_module/name_of_module.md | Failed: Network error: Not Found

[franzenr]

Can't reproduce errors in:

• reproducibility.md
• regular_expressions_lookaheads.md
• data_visualization_in_open_source_software.md
• regular_expressions_groups.md
• regular_expressions_basics.md
• intro_to_nhst.md
• demystifying_geospatial_data.md

If these links continue to throw issues on future runs, it might be worth considering adding the files to the exceptions list, or further improving the exceptions approach by specifying certain links that we will always ignore, but still check the remainder of the file for any other links that failed.