I am currently using DEXseq for alternative splicing analysis. After reading the official documents and my own practical application, I found that when the sample size exceeds 20, the calculation will always stop at the DEXSeq()function. At present, BPPARAM = MultiCoreParam() has been used according to the document and genes with too many 0 values have been deleted.
May I ask, can the BatchJobsParam() mentioned in the documentation for use with large samples provide instructions or examples for adapting to the DEXseq project?
Hello, DEXseq team,
I am currently using DEXseq for alternative splicing analysis. After reading the official documents and my own practical application, I found that when the sample size exceeds 20, the calculation will always stop at the
DEXSeq()function. At present,BPPARAM = MultiCoreParam()has been used according to the document and genes with too many 0 values have been deleted.May I ask, can the
BatchJobsParam()mentioned in the documentation for use with large samples provide instructions or examples for adapting to the DEXseq project?Thanks in advance for any suggestions.