arghosh / AKT

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Issue while running AKT with individual snp data #15

Open Anushka2899 opened 1 year ago

Anushka2899 commented 1 year ago

Hi, I converted a vcf file containing the information of the individual sample HG00096 taken from the 1000 Genomes project and convert it to bcf format using bcftools. I used data/wgs.hg38.vcf.gz but have been receiving the following error-

akt: Eigen/src/Core/DenseCoeffsBase.h:425: Eigen::DenseCoeffsBase<Derived, 1>::Scalar& Eigen::DenseCoeffsBase<Derived, 1>::operator()(Eigen::Index) [with Derived = Eigen::Matrix<float, -1, 1>; Eigen::DenseCoeffsBase<Derived, 1>::Scalar = float; Eigen::Index = long int]: Assertion `index >= 0 && index < size()' failed.

Can you suggest any solution for this? Thank you.