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ariel-waisman / LabelsToROIs

A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification
GNU General Public License v3.0
21 stars 9 forks source link

Error loading plugin #3

Closed flashdrive1 closed 3 years ago

flashdrive1 commented 3 years ago

When I try to load the plugin, I get the error message SyntaxError: ("mismatched input ',' expecting COLON", ('', 309, 73, " with open(full_table_path, 'a') as full_table_file, open(path_to_multiple_Tables, 'r') as current_table:\n")). I saw other people were having this same issue and to update their version of ImageJ. I went to the Help->update ImageJ and it says I am running the most recent version yet am still having the same error message. Thanks

ariel-waisman commented 3 years ago

Hi! Sorry to hear you had issues running the plugin. This plugin was built for use in FIJI, which is a version of ImageJ full of libraries and tools for biological-image analysis. Are you using ImageJ or FIJI? I got the same error when trying to run the plugin with basic imageJ. I will try to see what's wrong and fix it. But you shouldn't have any problems using it in Fiji.

Download link: https://imagej.net/software/fiji/

Hope that helps! Nice weekend, Ariel

flashdrive1 commented 3 years ago

Thanks. I was using basic ImageJ, with FIJI it works.