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aristoteleo / spateo-viewer

Web application demonstrating 3D modeling of spatial transcriptomics
BSD 2-Clause "Simplified" License
15 stars 4 forks source link

trame version compatibility #5

Closed Harrison-Q-Ma closed 1 year ago

Harrison-Q-Ma commented 1 year ago

Hello,

trame has released 3.X.X version 2 weeks ago which is incompatible with the current spateo-viewer implementation, specifically line 4 from trame.widgets import trame as trame_widgets in stviewer/interactive_app.py which raises error ImportError: cannot import name 'trame' from 'trame.widgets' (/Users/harrisonma/opt/anaconda3/lib/python3.9/site-packages/trame/widgets/__init__.py). I rolled back to trame version 2.5.2 and it worked fine. Please consider changing requirements.txt to limit trame version to be trame>=2.2.5,<3. Thanks.

Yao-14 commented 1 year ago

Hi @Harrison-Q-Ma , thanks a lot for your suggestion. Currently trame is still in a rapid development stage, so the version of trame may cause spateo-viewer not to work well. Now we will change requirements.txt according to your suggestion, and we will update spateo-viewer after a while.