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arjunrajlaboratory / DeepTile

Large image tiling and stitching library for scaling Python functions to arbitrary input image sizes.
MIT License
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Stitching ND2 files #2

Closed tischi closed 3 months ago

tischi commented 5 months ago

Hi,

Thank you for creating this library.

We have one ND2 file that contains 9 positions, where each position contains 3 channels. Could your software stitch those 9 positions into one 3 channel image?

The positions are sorted as 

1 2 3
6 5 4
7 8 9

Is that something that your software supports?

zjniu commented 4 months ago

Hi, thank you for your interest in this library, and my apologies for the delayed response! Yes, DeepTile supports stitching for such an ND2 file. Please see the notebook https://github.com/arjunrajlaboratory/DeepTile/blob/master/notebooks/nd2.ipynb for an example. If you need any help with it, please let me know.

zjniu commented 3 months ago

Closing this issue for now. Feel free to reopen if needed.