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arkal / Transgene

This is a repository to host the transgene tool. Transgene takes a snpeffed vcf and a peptide fasta , and returns 3 peptide fastas containing 9-, 10- and 15-mers harboring the called mutations
Apache License 2.0
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Add indel support (resolves #30) #36

Closed arkal closed 6 years ago

arkal commented 6 years ago

resolves #30

Add code to process indels, chained with each other and with snvs/mavs. Update tests to ensure new code works