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arkal
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Transgene
This is a repository to host the transgene tool. Transgene takes a snpeffed vcf and a peptide fasta , and returns 3 peptide fastas containing 9-, 10- and 15-mers harboring the called mutations
Apache License 2.0
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Add support for new gencode peptide fasta header (resolves #11)
#12
arkal
closed
7 years ago
0
Add support for new gencode format
#11
arkal
closed
7 years ago
0
Add fusion support (resolves #1)
#10
jpfeil
closed
7 years ago
4
Emit normal peptides (resolves #8)
#9
arkal
closed
7 years ago
0
Emit normal peptides
#8
arkal
closed
7 years ago
0
Add fusion test
#7
jpfeil
closed
8 years ago
0
Add unit tests (resolves #5)
#6
jpfeil
closed
8 years ago
3
Add unit tests
#5
jpfeil
closed
8 years ago
0
Emit a processed vcf
#4
arkal
closed
7 years ago
1
Add filtering by RNA-seq
#3
arkal
closed
7 years ago
1
Add fusion support (resolves #1)
#2
jpfeil
closed
7 years ago
12
Add fusion support
#1
jpfeil
closed
7 years ago
1
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