Make hardcoded paths configurable via environment variables

arpcard / rgi

Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.

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Make hardcoded paths configurable via environment variables #161

Closed innovate-invent closed 3 years ago

innovate-invent commented 3 years ago

DB_PATH will override script_path/_db/ DATA_PATH will override script_path/_data/

Resolves #155