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arpcard / rgi

Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.
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[BUG] #192

Closed TommyH-Tran closed 1 year ago

TommyH-Tran commented 2 years ago

I just tried to install rgi on an m1 Mac and I got this error.

Traceback (most recent call last): File "/Users/klemonlab/rgi/rgi", line 2, in from app.MainBase import MainBase File "/Users/klemonlab/rgi/app/MainBase.py", line 16, in from app.BWT import BWT File "/Users/klemonlab/rgi/app/BWT.py", line 9, in import dask.dataframe as dd ModuleNotFoundError: No module named 'dask'

Not sure exactly what this means?

raphenya commented 2 years ago

@TommyH-Tran, I have added the use of dask.dataframe module recently to improve efficiency. It appears the module is not included in your environment. The requirements are in https://github.com/arpcard/rgi/blob/master/requirements.txt.

raphenya commented 1 year ago

Closing, @TommyH-Tran please re-open if you still have the same issue. Cheers.