OSError: [Errno 16] Resource busy

arpcard / rgi

Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.

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OSError: [Errno 16] Resource busy #196

Closed peflanag closed 1 year ago

peflanag commented 1 year ago

Hi,

I'm new to RGI and I was running 16 samples through it. Half way through my samples I get the following error;

OSError: [Errno 16] Resource busy: '/Volumes/NMRSARL/MiSeqFastQFiles/S_maltophilia/RGI/M220598.fasta.temp.predictedGenes.json'

The program still seems to run on the remainder samples with the same error per sample and generates the .txt and .json file but the other temp files remain. can I assume that the .txt files are correct?

Cheers,

raphenya commented 1 year ago

@peflanag maybe try running the one sample on it's own and see if you get the same error message?

raphenya commented 1 year ago

@peflanag please re-open the issue if you still need help on this.