Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.
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[BUG] Salmonella sequence with best hit to Ecoli soxR instead of Salmonella soxR #220
Salmonella isolate gives a Best_Hit_ARO to Escherichia coli soxR with mutation conferring antibiotic resistance instead of Salmonella soxR with mutation conferring antibiotic resistance despite blastp showing a perfect match to Salmonella soxR sequence.
Salmonella isolate gives a Best_Hit_ARO to Escherichia coli soxR with mutation conferring antibiotic resistance instead of Salmonella soxR with mutation conferring antibiotic resistance despite blastp showing a perfect match to Salmonella soxR sequence.
Web portal - RGI 6.0.1, CARD 3.2.6
This is the predicted protein: