Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.
Error log
please see the attached log below
test.log
CARD Version
3.2.6
RGI version
6.0.2
Expected behavior
tests should complete without errors
Desktop (please complete the following information):
OS: linux Python 3.10.9, pytest-7.2.2, pluggy-1.0.0
Additional context
i am attempting to build and package rgi for BioArchlinux project. i have all the suggested dependencies installed. however, while attemting to run ./test.sh script as suggested in issue #25
Describe the bug the test script is failing
Input `./test.sh
Error log please see the attached log below test.log
CARD Version 3.2.6
RGI version 6.0.2
Expected behavior tests should complete without errors
Desktop (please complete the following information):
Additional context i am attempting to build and package rgi for BioArchlinux project. i have all the suggested dependencies installed. however, while attemting to run
./test.sh
script as suggested in issue #25following are dependencies installed