CARD version not available

[shreya1singh728]

Hello RGI team, I installed RGI using the following commands : git clone https://github.com/arpcard/rgi conda env create -f conda_env.yml conda activate rgi pip install git+https://github.com/arpcard/rgi.git and then downloaded the database as follows : wget https://card.mcmaster.ca/latest/data tar -xvf data ./card.json The installation was done successfully but it is not displaying the version of the installed database. I get the following results:

Please suggest a solution.

Thankyou in advance. Regards, Shreya

[hunglin59638]

You still need to type as following:

rgi card_annotation -i /path/to/card.json

It will generate card_database_v3.2.8.fasta and card_database_v3.2.8_all.fasta in the current directory. Then, load them.

rgi load -i /path/to/card.json --card_annotation card_database_v3.2.8.fasta  --card_annotation_all_models card_database_v3.2.8_all.fasta
rgi database --version
# 3.2.8

Or just do this, it can download all CARD and WildCARD.

rgi auto_load
rgi database --version
# 3.2.8

[raphenya]

@hunglin59638 Thank you!