NotImplementedError: "intersectBed" does not appear to be installed or on the path, so this method is disabled. Please install a more recent version of BEDTools and re-import to use this method. #152
a = pybedtools.example_bedtool('a.bed')
b = pybedtools.example_bedtool('b.bed')
a_and_b = a.intersect(b)
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It gives the response below:
Traceback (most recent call last):
File "", line 1, in
File "/home/burcak/anaconda3/lib/python3.7/site-packages/pybedtools/bedtool.py", line 840, in decorated
result = method(self, *args, **kwargs)
File "/home/burcak/anaconda3/lib/python3.7/site-packages/pybedtools/bedtool.py", line 212, in not_implemented_func
raise NotImplementedError(help_str)
NotImplementedError: "intersectBed" does not appear to be installed or on the path, so this method is disabled. Please install a more recent version of BEDTools and re-import to use this method.
################################
I installed pybedtools 0.8.0
################################ import pybedtools
a = pybedtools.example_bedtool('a.bed') b = pybedtools.example_bedtool('b.bed') a_and_b = a.intersect(b) ################################
################################ It gives the response below: Traceback (most recent call last): File "", line 1, in
File "/home/burcak/anaconda3/lib/python3.7/site-packages/pybedtools/bedtool.py", line 840, in decorated
result = method(self, *args, **kwargs)
File "/home/burcak/anaconda3/lib/python3.7/site-packages/pybedtools/bedtool.py", line 212, in not_implemented_func
raise NotImplementedError(help_str)
NotImplementedError: "intersectBed" does not appear to be installed or on the path, so this method is disabled. Please install a more recent version of BEDTools and re-import to use this method.
################################