arq5x / bedtools

A powerful toolset for genome arithmetic.
http://code.google.com/p/bedtools/
GNU General Public License v2.0
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bedtools makewindows with large genome size #164

Open leegene1992 opened 2 years ago

leegene1992 commented 2 years ago

Dear friend, It's a kind reminder that the bedtools makewindows will not work for large genome size, like larger than 4.29Gb. Could you set the maximum size larger? The 4.29Gb is not enough for large genomes, like lungfish. Best, Jing See below:

sc1     4250000000      4260000000
sc1     4260000000      4270000000
sc1     4270000000      4280000000
sc1     4280000000      4290000000
sc1     4290000000      5032704
sc1     5032704 15032704
sc1     15032704        25032704
sc1     25032704        35032704
sc1     35032704        45032704