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arq5x / lumpy-sv

lumpy: a general probabilistic framework for structural variant discovery
MIT License
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SV truth set #255

Open arkyl opened 6 years ago

arkyl commented 6 years ago

Hi, In the lumpy paper, there is a deletion truth set validated by the pacbio or moleculo. I can see there is an additional file 4 in the pdf version of the paper. However, I didn't find the info or links of additional files on the html version. I am wondering how to get this truth set. Thanks a lot! Yue

ryanlayer commented 6 years ago

https://genomebiology.biomedcentral.com/articles/10.1186/gb-2014-15-6-r84

https://static-content.springer.com/esm/art%3A10.1186%2Fgb-2014-15-6-r84/MediaObjects/13059_2013_3363_MOESM4_ESM.zip

On Wed, Jul 11, 2018 at 4:15 PM ylark notifications@github.com wrote:

Hi, In the lumpy paper, there is a deletion truth set validated by the pacbio or moleculo. I can see there is an additional file 4 in the pdf version of the paper. However, I didn't find the info or links of additional files on the html version. I am wondering how to get this truth set. Thanks a lot! Yue

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arkyl commented 6 years ago

Thanks very much. I still can't find the link on the paper but I got the file from your zip file.