Threshold for evaluating CNV variants

arq5x / lumpy-sv

lumpy: a general probabilistic framework for structural variant discovery

MIT License

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Threshold for evaluating CNV variants #327

Open HyunjunNam opened 4 years ago

HyunjunNam commented 4 years ago

Hi,

I've got the Lumpy results based on several Tumor samples. In terms of SQ (QUAL) score, does it have a kind of general minimum cutoff for evaluating CNV variants?

Thanks,