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arq5x / poretools

a toolkit for working with Oxford nanopore data
MIT License
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About occupancy #130

Open wososa opened 7 years ago

wososa commented 7 years ago

Hi,

I tried the following: poretools occupancy --saveas occupancy.png folder

I got the error: AttributeError: 'NoneType' object has no attribute 'seq'

Any fix?

Thanks, Woody

tanaes commented 6 years ago

Per another raised issue #149 , I find that I have to provide a specific subfolder with the fast5 reads, e.g. poretools occupancy run/fast5/pass