search

arq5x / poretools

a toolkit for working with Oxford nanopore data
MIT License
243 stars 89 forks source link

'--group' parameter in poretools #153

Open wyzhangMPI opened 7 years ago

wyzhangMPI commented 7 years ago

As I can understand, to get the info from fast5 files which have been base called twice, --group 1 is used. In this case, only the info for base-calling from second base-caller will be obtained, is that right? And also, if the fast5 files are base-called with more base-callers, --group 2, 3, etc need to be used, is this correct?

Thanks!

Wenyu

wyzhangMPI commented 7 years ago

Also, it seems that the "--group" parameter does not apply for poretools stats function. That is to say, poretoos stats can only generate the info for the first base-calling dataset?