arq5x / poretools

a toolkit for working with Oxford nanopore data
MIT License
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Installation problems #165

Open TullyIJ opened 6 years ago

TullyIJ commented 6 years ago

Hi, I'm struggling to install on OSX High Sierra - I've been through and installed Python 2.7 and 3.6 with home-brew, checked that setuptools and pip are up to date and installed Cython and Numpy as per instructions. I get the same error message, followed by hanging in terminal, whenever I try to install pore tools:

[11/11] Cythonizing /tmp/easy_install-Kliezn/h5py-2.7.1/temp/easy_install-r7GcsC/Cython-0.27.3/Cython/Tempita/_tempita.py warning: no files found matching '2to3-fixers.txt' warning: no files found matching 'Doc/' warning: no files found matching '.pyx' under directory 'Cython/Debugger/Tests' warning: no files found matching '.pxd' under directory 'Cython/Debugger/Tests' warning: no files found matching '.pxd' under directory 'Cython/Utility'

Can anyone help me?

Thank you in advance