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arq5x / poretools

a toolkit for working with Oxford nanopore data
MIT License
239 stars 90 forks source link

not working... #182

Open dunedice opened 5 years ago

dunedice commented 5 years ago

yes, followed install instructs, yes, python 3.7:

$ poretools fastq --type fwd /Users/smwaters/Documents/Test-Run/single-fast-5/0 /Users/smwaters/Documents/Test-Run/Guppy-Fastq Traceback (most recent call last): File "/Users/smwaters/Documents/my_env/anaconda3/bin/poretools", line 11, in load_entry_point('poretools==0.6.0', 'console_scripts', 'poretools')() File "/Users/smwaters/Documents/my_env/anaconda3/lib/python3.7/site-packages/pkg_resources/init.py", line 489, in load_entry_point return get_distribution(dist).load_entry_point(group, name) File "/Users/smwaters/Documents/my_env/anaconda3/lib/python3.7/site-packages/pkg_resources/init.py", line 2793, in load_entry_point return ep.load() File "/Users/smwaters/Documents/my_env/anaconda3/lib/python3.7/site-packages/pkg_resources/init.py", line 2411, in load return self.resolve() File "/Users/smwaters/Documents/my_env/anaconda3/lib/python3.7/site-packages/pkg_resources/init.py", line 2417, in resolve module = import(self.module_name, fromlist=['name'], level=0) File "/Users/smwaters/Documents/my_env/anaconda3/lib/python3.7/site-packages/poretools-0.6.0-py3.7.egg/poretools/init.py", line 4, in from Fast5File import * ModuleNotFoundError: No module named 'Fast5File'