Add support for WIMP - Githubissues

arq5x / poretools

a toolkit for working with Oxford nanopore data

MIT License

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Add support for WIMP #67

Open nickloman opened 8 years ago

nickloman commented 8 years ago

The WIMP workflow adds an additional group Analyses/Classification_000 - this stores the taxonomic profile information. Add support to extract via poretools.

timp0 commented 8 years ago

You really only need the taxid and possibly the score I would think? I have example data if needed to help; I kludged my only python to extract for now.

arq5x commented 8 years ago

Should we keep this open?

timp0 commented 8 years ago

Well - I don't need it (wrote my own kludge) but I think it is of value, I have gotten questions about if it is possible to extract the WIMP kraken info.