What steps will reproduce the problem?
1.Hi, i am installing cd-hit with openmp=yes option for nucleotide sequence
clustering. it seems, it compile properly and run Ok but when i am using -T
option for threads. it gives error!!
Program: CD-HIT, V4.6 (+OpenMP), Apr 25 2014, 16:47:37
Command: ./cd-hit-est -i GH48.fasta -o sandeep -c 0.9 -n 10 -M
2000 -T 2
Started: Fri Apr 25 16:50:02 2014
================================================================
Output
----------------------------------------------------------------
total seq: 464
longest and shortest : 2970010 and 396
Total letters: 6460438
Sequences have been sorted
Segmentation fault
What is the expected output? What do you see instead?
i am expecting thread option should work and use number of cpus
What version of the product are you using? On what operating system?
CD-HIT, V4.6
Please provide any additional information below.
plz help me out
Original issue reported on code.google.com by sonubioi...@gmail.com on 25 Apr 2014 at 2:58
Original issue reported on code.google.com by
sonubioi...@gmail.com
on 25 Apr 2014 at 2:58