barcodes removed during basecalling

artic-network / artic-ncov2019

ARTIC nanopore protocol for nCoV2019 novel coronavirus

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Closed erinyoung closed 4 years ago

erinyoung commented 4 years ago

What about ONT runs that use the demultiplexing and barcoding trimming option when starting a run?

rambaut commented 4 years ago

We are considering how to allow RAMPART to work with runs with demultiplexing by MinKNOW but there are some issues that need looking at.