Closed deearahman closed 3 years ago
Having the same issue here. No samplename.variants.tab
output for any of my samples. Everything else looks OK though.
Same here!
Sorry - just come across this.
Looks like this output file got silently dropped from the output during transition from v1.0.0 -> v1.1.0-rc. All information is available in the VCF.
We will remove this from the SOP for now. Please raise an issue over on the artic pipeline if you want this adding back in.
I don’t have the variant output. Was there any step that I missed?