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artic-network / artic-ncov2019

ARTIC nanopore protocol for nCoV2019 novel coronavirus
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Rampart & Barcoding in MinKNOW #6

Closed mattdmem closed 4 years ago

mattdmem commented 4 years ago

We are about to start our 1st nCov run using the ARTIC protocol. We plan to use RAMPART to monitor the run. Do we need to have barcoding on or off in MinKNOW? If we have it on the fastq_pass folder will have sub folders for barcode01 barcode02 etc - will that still work with RAMPART?

Thanks!

mattdmem commented 4 years ago

Closing as I got an answer in the rampart repo