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artic-network / fieldbioinformatics

The ARTIC field bioinformatics pipeline
MIT License
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MinKNOW sequencing_summary filenames #4

Closed sagrudd closed 4 years ago

sagrudd commented 4 years ago

With MinKNOW the sequencing_summary filename includes both the flowcell id and run_id - this breaks artic workflow directly for e.g. GridION devices

The change here (first is the main branch) will fix an issue a couple of users have seen

nickloman commented 4 years ago

Thank you for this, sorry for delay merging!