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aryarm / as_analysis

A complete Snakemake pipeline for detecting allele specific expression in RNA-seq
MIT License
10 stars 9 forks source link

use checkpoints instead of dynamic #51

Closed aryarm closed 4 years ago

aryarm commented 5 years ago

dynamic will be deprecated in snakemake 6.0 https://snakemake.readthedocs.io/en/stable/snakefiles/rules.html?highlight=dynamic#data-dependent-conditional-execution

aryarm commented 4 years ago

I ended up using directory() instead of checkpoints. Hopefully that doesn't come back to bite me.