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aryarm / varCA

Use an ensemble of variant callers to call variants from ATAC-seq data
MIT License
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example data #9

Closed aryarm closed 4 years ago

aryarm commented 4 years ago

provide example data for running the pipeline from start to finish

aryarm commented 4 years ago

and set up the config files so that the pipeline can easily work that data out of the box

remove mentions of any of my own paths from the config files

aryarm commented 4 years ago

maybe we could try a smaller dataset so things run faster? maybe just a single chromosome?

gmcvicker commented 4 years ago

I think it's a good idea to have a smaller dataset to make the example run faster.