aryeelab / guideseq

Analysis pipeline for the GUIDE-seq assay.
GNU Affero General Public License v3.0
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ImportError: cannot import name 'demultiplex' from 'umi' #75

Open qicheng-ma opened 3 months ago

qicheng-ma commented 3 months ago

Dear Admin,

After I install Guidseq from conda, when I run it, it says there is no "UMI" package, so I installed " umi " package and " demultiplex " package by:

$pip3 install umi $pip3 install demultiplex

But when I run "python3 guideseq.py identify ", I get the error message: ... ... guideseq.py:230: SyntaxWarning: "is" with a literal. Did you mean "=="? if sample is 'control': Traceback (most recent call last):

line 23, in from umi import demultiplex, umitag, consolidate ImportError: cannot import name 'demultiplex' from 'umi'

I appreciate your help! Thanks!